Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RANP4-201ENST00000413361 655 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 AL365396.1-201ENST00000430854 671 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 RPS26P40-201ENST00000435209 294 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 snoU13.24-201ENST00000458998 104 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 AC113430.1-201ENST00000506872 718 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 AC011602.1-201ENST00000546484 331 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 MIR4425-201ENST00000580572 84 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 uc_338.25-201ENST00000613756 156 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 AC024341.1-201ENST00000526444 1552 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 AL132656.3-201ENST00000606384 1595 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 AC119744.1-201ENST00000454746 1715 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 HSPA8P1-201ENST00000425843 1833 ntBASIC5.1□□□□□ -1.59
VPS8Q8N3P4 SNORA7.4-201ENST00000384249 137 ntBASIC5.1□□□□□ -1.59
VPS8Q8N3P4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 CYCSP32-201ENST00000440548 321 ntBASIC5.1□□□□□ -1.59
VPS8Q8N3P4 RN7SL863P-201ENST00000462370 296 ntBASIC5.1□□□□□ -1.59
VPS8Q8N3P4 RN7SL809P-201ENST00000482040 297 ntBASIC5.1□□□□□ -1.59
VPS8Q8N3P4 RPL32P34-201ENST00000486380 400 ntBASIC5.1□□□□□ -1.59
VPS8Q8N3P4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 OR2BH1P-201ENST00000608850 864 ntBASIC5.1□□□□□ -1.59
VPS8Q8N3P4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS8Q8N3P4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS8Q8N3P4 TAF9BP1-201ENST00000396646 746 ntBASIC5.09□□□□□ -1.59
VPS8Q8N3P4 GSTA8P-201ENST00000404253 637 ntBASIC5.09□□□□□ -1.59
VPS8Q8N3P4 Z99127.3-201ENST00000448158 395 ntBASIC5.09□□□□□ -1.59
VPS8Q8N3P4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS8Q8N3P4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS8Q8N3P4 AC011471.1-201ENST00000585766 187 ntBASIC5.09□□□□□ -1.59
VPS8Q8N3P4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS8Q8N3P4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS8Q8N3P4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS8Q8N3P4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC5.09□□□□□ -1.6
VPS8Q8N3P4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS8Q8N3P4 NEAT1-202ENST00000501122 22743 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 AL136131.1-201ENST00000406079 803 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 BX679664.1-201ENST00000434429 253 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 AC010401.1-201ENST00000463867 348 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 RN7SKP116-201ENST00000516902 319 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 RN7SKP57-201ENST00000517248 293 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 AC006518.1-201ENST00000541449 943 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 AC125494.3-201ENST00000602759 455 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 AC073869.7-201ENST00000640874 297 ntBASIC5.08□□□□□ -1.6
VPS8Q8N3P4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS8Q8N3P4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 Z98941.1-201ENST00000407764 100 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 RNU4-47P-201ENST00000410876 114 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AC002524.1-201ENST00000411687 547 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 FTLP19-201ENST00000433300 394 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AL162713.1-201ENST00000604480 262 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 Z82195.1-201ENST00000604558 398 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AL160281.1-201ENST00000605307 311 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AC005000.2-201ENST00000605468 310 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AC084036.1-201ENST00000609190 508 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AP001002.2-201ENST00000625137 386 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AL031985.3-201ENST00000565390 2449 ntBASIC5.07□□□□□ -1.6
VPS8Q8N3P4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
VPS8Q8N3P4 AC073325.2-201ENST00000339545 159 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 NDUFB4P4-201ENST00000404822 243 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 UBE2V1P1-201ENST00000430836 445 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 RNU1-143P-201ENST00000516296 146 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AC093014.1-201ENST00000548926 724 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 AC005242.1-201ENST00000585658 438 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 VN1R92P-201ENST00000598511 928 ntBASIC5.06□□□□□ -1.6
VPS8Q8N3P4 U1.23-201ENST00000610293 146 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms