Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RPS3AP50-201ENST00000487064 803 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 LARP7P3-201ENST00000579888 337 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AC104763.2-201ENST00000604179 382 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AL672296.1-201ENST00000427780 2158 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AC093156.1-201ENST00000440382 670 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 RN7SL863P-201ENST00000462370 296 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 HIGD1AP1-201ENST00000550979 275 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AC103968.1-201ENST00000557841 573 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 IGHV3-29-201ENST00000604817 344 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 ZNF90P1-201ENST00000480493 1951 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AC062016.1-201ENST00000355719 319 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 MIR4276-201ENST00000584832 70 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 MTND4P26-201ENST00000415971 1359 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 NANOGP6-201ENST00000429190 847 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 RPS29P26-201ENST00000477483 171 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 KC877373.1-201ENST00000479066 408 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 RFPL4AP5-201ENST00000514977 504 ntBASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VPS13DQ5THJ4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC108734.1-201ENST00000439549 399 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC239809.1-201ENST00000450470 217 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 SETP1-201ENST00000556014 845 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC015813.4-201ENST00000610469 179 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC074276.2-201ENST00000619891 348 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 FAM35BP-202ENST00000497389 3337 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 KPNA2P2-201ENST00000419546 1489 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AL513175.1-201ENST00000431492 780 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC069499.1-201ENST00000489433 509 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 RN7SKP209-201ENST00000516888 304 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 PSMA2P1-201ENST00000526365 646 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AL513302.2-201ENST00000562313 1842 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AL138885.1-201ENST00000405921 675 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC007899.1-201ENST00000412776 775 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 HIGD1AP3-201ENST00000515857 278 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 MYL12AP1-201ENST00000518490 515 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AL121766.1-201ENST00000547436 487 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 CYP2C60P-201ENST00000566088 139 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 OR6R2P-201ENST00000609216 300 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 BMS1P21-201ENST00000634565 365 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms