Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC079804.1-201ENST00000461922 436 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC022034.3-201ENST00000471393 478 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC091868.1-201ENST00000508746 304 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN1BQ07699 MTCO1P30-201ENST00000515244 580 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 RNU1-6P-201ENST00000516290 144 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC010376.1-201ENST00000522101 334 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN1BQ07699 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 HMGN2P6-201ENST00000551091 273 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 CBX3P5-201ENST00000552017 521 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN1BQ07699 VN1R79P-201ENST00000593540 513 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC092954.1-201ENST00000609121 445 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC084824.4-201ENST00000620106 731 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC026634.1-201ENST00000634369 198 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.99□□□□□ -1.77
SCN1BQ07699 MFSD8-245ENST00000641743 948 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SCN1BQ07699 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.99□□□□□ -1.77
SCN1BQ07699 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN1BQ07699 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 NCLP2-201ENST00000416078 1462 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SCN1BQ07699 RARSP1-201ENST00000542842 1418 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SCN1BQ07699 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SCN1BQ07699 RNU6-335P-201ENST00000364563 113 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SCN1BQ07699 RNU6-657P-201ENST00000383904 107 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 U3.30-201ENST00000391308 210 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AL121972.1-201ENST00000402023 252 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 MIR1178-201ENST00000408396 91 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AC092647.1-201ENST00000420654 287 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN1BQ07699 RAC1P8-201ENST00000427086 527 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN1BQ07699 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 AC004022.1-201ENST00000447766 1066 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 OR1H1P-201ENST00000448731 937 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 snoU13.3-201ENST00000459441 104 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 RPL7AP6-201ENST00000477943 801 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 VPS26AP1-201ENST00000483197 979 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 RN7SL808P-201ENST00000496066 299 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 BOLA3P3-201ENST00000505182 232 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AC017037.1-201ENST00000508460 471 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 AC005921.1-201ENST00000510589 286 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN1BQ07699 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN1BQ07699 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 GCSHP4-201ENST00000538792 439 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.98□□□□□ -1.77
SCN1BQ07699 MTCYBP27-201ENST00000555160 670 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 SULT1C2P1-202ENST00000562418 459 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 MIR5699-201ENST00000578903 90 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN1BQ07699 AC023762.1-201ENST00000603280 584 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AC025946.2-201ENST00000603398 234 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AC010201.1-201ENST00000605051 540 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms