Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCL20P78556 TMED11P-201ENST00000479478 690 ntBASIC2.76□□□□□ -1.97
CCL20P78556 AP000926.3-201ENST00000497201 299 ntBASIC2.76□□□□□ -1.97
CCL20P78556 SETP14-201ENST00000497538 873 ntBASIC2.76□□□□□ -1.97
CCL20P78556 AC110792.2-201ENST00000510278 224 ntBASIC2.76□□□□□ -1.97
CCL20P78556 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC2.76□□□□□ -1.97
CCL20P78556 AC245166.1-201ENST00000521012 253 ntBASIC2.76□□□□□ -1.97
CCL20P78556 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.76□□□□□ -1.97
CCL20P78556 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL20P78556 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCL20P78556 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL20P78556 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.76□□□□□ -1.97
CCL20P78556 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL20P78556 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.76□□□□□ -1.97
CCL20P78556 AC090888.3-201ENST00000558917 509 ntBASIC2.76□□□□□ -1.97
CCL20P78556 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.76□□□□□ -1.97
CCL20P78556 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC2.76□□□□□ -1.97
CCL20P78556 AC015726.1-201ENST00000602353 681 ntBASIC2.76□□□□□ -1.97
CCL20P78556 HMGB1P51-201ENST00000605166 638 ntBASIC2.76□□□□□ -1.97
CCL20P78556 FAM25E-202ENST00000608562 189 ntBASIC2.76□□□□□ -1.97
CCL20P78556 AC016769.4-201ENST00000616893 535 ntBASIC2.76□□□□□ -1.97
CCL20P78556 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.76□□□□□ -1.97
CCL20P78556 AP000553.6-201ENST00000641242 118 ntBASIC2.76□□□□□ -1.97
CCL20P78556 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL20P78556 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.76□□□□□ -1.97
CCL20P78556 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCL20P78556 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.75□□□□□ -1.97
CCL20P78556 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 METTL5-202ENST00000308099 629 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL20P78556 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
CCL20P78556 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 PTMAP5-201ENST00000393073 333 ntBASIC2.75□□□□□ -1.97
CCL20P78556 RPL21P3-201ENST00000395517 478 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL20P78556 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL20P78556 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL20P78556 AL356968.1-201ENST00000416622 474 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.75□□□□□ -1.97
CCL20P78556 DNAJC19P7-201ENST00000428811 344 ntBASIC2.75□□□□□ -1.97
CCL20P78556 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.75□□□□□ -1.97
CCL20P78556 AL627308.1-201ENST00000435693 821 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL20P78556 HMGB3P11-201ENST00000440127 604 ntBASIC2.75□□□□□ -1.97
CCL20P78556 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.75□□□□□ -1.97
CCL20P78556 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL20P78556 AC010655.1-201ENST00000449336 292 ntBASIC2.75□□□□□ -1.97
CCL20P78556 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL20P78556 AC146507.2-201ENST00000460608 476 ntBASIC2.75□□□□□ -1.97
CCL20P78556 RN7SL283P-201ENST00000489055 303 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AC091167.1-201ENST00000492017 396 ntBASIC2.75□□□□□ -1.97
CCL20P78556 UBE2CP3-201ENST00000502715 450 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.75□□□□□ -1.97
CCL20P78556 POU5F1P7-201ENST00000508759 541 ntBASIC2.75□□□□□ -1.97
CCL20P78556 RNU1-143P-201ENST00000516296 146 ntBASIC2.75□□□□□ -1.97
CCL20P78556 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.75□□□□□ -1.97
CCL20P78556 IGKV2D-19-201ENST00000523346 262 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AP004242.1-201ENST00000533701 349 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.75□□□□□ -1.97
CCL20P78556 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.75□□□□□ -1.97
CCL20P78556 TRAV37-201ENST00000553906 342 ntBASIC2.75□□□□□ -1.97
CCL20P78556 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.75□□□□□ -1.97
CCL20P78556 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.75□□□□□ -1.97
CCL20P78556 MIR4715-201ENST00000584117 79 ntBASIC2.75□□□□□ -1.97
CCL20P78556 PCNAP1-202ENST00000595299 752 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AL365400.2-201ENST00000605604 902 ntBASIC2.75□□□□□ -1.97
CCL20P78556 RNA5SP108-201ENST00000605921 117 ntBASIC2.75□□□□□ -1.97
CCL20P78556 AC113194.1-201ENST00000606037 500 ntBASIC2.75□□□□□ -1.97
CCL20P78556 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.75□□□□□ -1.97
CCL20P78556 U1.23-201ENST00000610293 146 ntBASIC2.75□□□□□ -1.97
CCL20P78556 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 RNU1-68P-201ENST00000615382 146 ntBASIC2.75□□□□□ -1.97
CCL20P78556 U1.39-201ENST00000621562 146 ntBASIC2.75□□□□□ -1.97
CCL20P78556 MIR4278-201ENST00000636094 69 ntBASIC2.75□□□□□ -1.97
CCL20P78556 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CCL20P78556 AC024560.2-201ENST00000507981 1497 ntBASIC2.75□□□□□ -1.97
CCL20P78556 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCL20P78556 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.75□□□□□ -1.97
CCL20P78556 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
CCL20P78556 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CCL20P78556 MTCO1P11-201ENST00000429111 1528 ntBASIC2.74□□□□□ -1.97
CCL20P78556 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCL20P78556 AC006042.3-201ENST00000454684 1469 ntBASIC2.74□□□□□ -1.97
CCL20P78556 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCL20P78556 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
CCL20P78556 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCL20P78556 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.74□□□□□ -1.97
CCL20P78556 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.74□□□□□ -1.97
CCL20P78556 AL133270.1-201ENST00000402635 279 ntBASIC2.74□□□□□ -1.97
CCL20P78556 RPS16P5-201ENST00000406501 404 ntBASIC2.74□□□□□ -1.97
CCL20P78556 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CCL20P78556 SPTLC1P2-201ENST00000407089 121 ntBASIC2.74□□□□□ -1.97
CCL20P78556 GTF3AP1-201ENST00000416942 1004 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms