Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 OR52B5P-201ENST00000435337 951 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AC074367.1-201ENST00000438685 1125 ntBASIC2.13□□□□□ -2.07
RPS28P62857 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 CNOT7P2-201ENST00000441051 832 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.13□□□□□ -2.07
RPS28P62857 PRDX3P3-201ENST00000447765 522 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.13□□□□□ -2.07
RPS28P62857 AL122020.1-201ENST00000472287 459 ntBASIC2.13□□□□□ -2.07
RPS28P62857 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPS28P62857 AC107398.1-201ENST00000486904 505 ntBASIC2.13□□□□□ -2.07
RPS28P62857 RN7SL182P-201ENST00000496499 300 ntBASIC2.13□□□□□ -2.07
RPS28P62857 OR5H3P-201ENST00000502817 919 ntBASIC2.13□□□□□ -2.07
RPS28P62857 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPS28P62857 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.13□□□□□ -2.07
RPS28P62857 AC090568.1-201ENST00000509499 856 ntBASIC2.13□□□□□ -2.07
RPS28P62857 CDC42P4-201ENST00000510507 563 ntBASIC2.13□□□□□ -2.07
RPS28P62857 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.13□□□□□ -2.07
RPS28P62857 CCNHP1-201ENST00000513311 678 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC2.13□□□□□ -2.07
RPS28P62857 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC2.13□□□□□ -2.07
RPS28P62857 RNA5SP217-201ENST00000515959 91 ntBASIC2.13□□□□□ -2.07
RPS28P62857 MRPS16P1-201ENST00000523462 412 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPS28P62857 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPS28P62857 AL121603.1-201ENST00000553815 142 ntBASIC2.13□□□□□ -2.07
RPS28P62857 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC2.13□□□□□ -2.07
RPS28P62857 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC2.13□□□□□ -2.07
RPS28P62857 MTCYBP28-201ENST00000566728 1132 ntBASIC2.13□□□□□ -2.07
RPS28P62857 NDUFA5P11-201ENST00000567995 343 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC2.13□□□□□ -2.07
RPS28P62857 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC2.13□□□□□ -2.07
RPS28P62857 AC103810.1-201ENST00000579873 453 ntBASIC2.13□□□□□ -2.07
RPS28P62857 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC2.13□□□□□ -2.07
RPS28P62857 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC2.13□□□□□ -2.07
RPS28P62857 XIAPP1-201ENST00000603162 600 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AP001330.4-201ENST00000604350 154 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AL136363.1-201ENST00000605349 337 ntBASIC2.13□□□□□ -2.07
RPS28P62857 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC2.13□□□□□ -2.07
RPS28P62857 RN7SL760P-201ENST00000607344 270 ntBASIC2.13□□□□□ -2.07
RPS28P62857 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.13□□□□□ -2.07
RPS28P62857 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.13□□□□□ -2.07
RPS28P62857 AC138904.2-201ENST00000614412 107 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AL512652.1-201ENST00000619006 500 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AP002799.1-201ENST00000623552 423 ntBASIC2.13□□□□□ -2.07
RPS28P62857 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPS28P62857 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC2.13□□□□□ -2.07
RPS28P62857 AC074101.1-201ENST00000637861 241 ntBASIC2.13□□□□□ -2.07
RPS28P62857 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RPS28P62857 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPS28P62857 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPS28P62857 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.13□□□□□ -2.07
RPS28P62857 AC090740.1-201ENST00000623193 2262 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC007342.9-201ENST00000623877 1385 ntBASIC2.12□□□□□ -2.07
RPS28P62857 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPS28P62857 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPS28P62857 RNU6-386P-201ENST00000362650 107 ntBASIC2.12□□□□□ -2.07
RPS28P62857 RNA5SP485-201ENST00000365053 119 ntBASIC2.12□□□□□ -2.07
RPS28P62857 SNORA51.8-201ENST00000384234 132 ntBASIC2.12□□□□□ -2.07
RPS28P62857 SNORA46-201ENST00000384762 135 ntBASIC2.12□□□□□ -2.07
RPS28P62857 SDHCP2-201ENST00000398565 501 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC003045.1-201ENST00000398779 713 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC080125.1-201ENST00000414888 684 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC006509.1-201ENST00000420788 634 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.12□□□□□ -2.07
RPS28P62857 AC073310.1-201ENST00000423226 1033 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC114973.1-201ENST00000429057 632 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.12□□□□□ -2.07
RPS28P62857 AC009299.1-201ENST00000429684 717 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 AC008072.1-201ENST00000434254 824 ntBASIC2.12□□□□□ -2.07
RPS28P62857 RPL36AP6-201ENST00000435770 321 ntBASIC2.12□□□□□ -2.07
RPS28P62857 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC2.12□□□□□ -2.07
RPS28P62857 AC079168.2-201ENST00000453977 416 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AP000705.1-201ENST00000454567 350 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC091153.1-201ENST00000466297 402 ntBASIC2.12□□□□□ -2.07
RPS28P62857 RN7SL228P-201ENST00000470060 303 ntBASIC2.12□□□□□ -2.07
RPS28P62857 RN7SL647P-201ENST00000485429 300 ntBASIC2.12□□□□□ -2.07
RPS28P62857 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RPS28P62857 RN7SL868P-201ENST00000485915 303 ntBASIC2.12□□□□□ -2.07
RPS28P62857 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RPS28P62857 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC2.12□□□□□ -2.07
RPS28P62857 GTF2F2P1-201ENST00000511083 675 ntBASIC2.12□□□□□ -2.07
RPS28P62857 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 ZNF519P4-201ENST00000514008 125 ntBASIC2.12□□□□□ -2.07
RPS28P62857 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.12□□□□□ -2.07
RPS28P62857 AC008494.2-201ENST00000514544 370 ntBASIC2.12□□□□□ -2.07
RPS28P62857 RN7SKP52-201ENST00000516219 250 ntBASIC2.12□□□□□ -2.07
RPS28P62857 SNORA31.9-201ENST00000516429 84 ntBASIC2.12□□□□□ -2.07
RPS28P62857 RNU1-104P-201ENST00000517280 175 ntBASIC2.12□□□□□ -2.07
RPS28P62857 WBP1LP3-201ENST00000523033 208 ntBASIC2.12□□□□□ -2.07
RPS28P62857 MTND1P6-201ENST00000523621 946 ntBASIC2.12□□□□□ -2.07
RPS28P62857 OR4V1P-201ENST00000525394 1140 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms