Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CKS1BP61024 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CKS1BP61024 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CKS1BP61024 GSTA12P-201ENST00000402398 508 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 NRBF2P2-201ENST00000413087 861 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC2.67□□□□□ -1.98
CKS1BP61024 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.67□□□□□ -1.98
CKS1BP61024 AC069213.2-201ENST00000420238 366 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC244098.2-201ENST00000422068 99 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 RPEP3-201ENST00000425462 676 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC2.67□□□□□ -1.98
CKS1BP61024 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.67□□□□□ -1.98
CKS1BP61024 CKS1BP5-201ENST00000434172 273 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.67□□□□□ -1.98
CKS1BP61024 RPL36AP15-201ENST00000444514 266 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.67□□□□□ -1.98
CKS1BP61024 RNA5SP246-201ENST00000458909 119 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC010401.1-201ENST00000463867 348 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 RN7SL177P-201ENST00000476596 299 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.67□□□□□ -1.98
CKS1BP61024 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.67□□□□□ -1.98
CKS1BP61024 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.67□□□□□ -1.98
CKS1BP61024 AC111000.3-201ENST00000508057 576 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC110768.1-201ENST00000509222 400 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC008958.1-201ENST00000511047 682 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC010476.1-201ENST00000519111 851 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.67□□□□□ -1.98
CKS1BP61024 MTCYBP41-201ENST00000528913 1123 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC007536.1-201ENST00000533382 349 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC092747.2-201ENST00000545069 983 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.67□□□□□ -1.98
CKS1BP61024 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.67□□□□□ -1.98
CKS1BP61024 AC022968.1-201ENST00000567372 442 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.67□□□□□ -1.98
CKS1BP61024 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.67□□□□□ -1.98
CKS1BP61024 AC112230.1-201ENST00000604342 547 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.67□□□□□ -1.98
CKS1BP61024 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CKS1BP61024 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CKS1BP61024 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CKS1BP61024 AC010733.2-201ENST00000589496 5702 ntBASIC2.67□□□□□ -1.98
CKS1BP61024 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CKS1BP61024 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.67□□□□□ -1.98
CKS1BP61024 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.66□□□□□ -1.98
CKS1BP61024 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.66□□□□□ -1.98
CKS1BP61024 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CKS1BP61024 RPL23AP59-201ENST00000399415 461 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 MIR887-201ENST00000401258 79 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 HLFP1-201ENST00000402375 499 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 RPL37P18-201ENST00000411602 243 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.66□□□□□ -1.98
CKS1BP61024 RFESDP1-201ENST00000422350 461 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 GLRXP1-201ENST00000423261 334 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 AC006455.6-201ENST00000426192 893 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 RPS29P17-201ENST00000430795 166 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.66□□□□□ -1.98
CKS1BP61024 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC2.66□□□□□ -1.98
CKS1BP61024 AC140076.1-201ENST00000449897 361 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 AC098824.1-201ENST00000453565 980 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CKS1BP61024 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CKS1BP61024 RPL5P24-201ENST00000463742 885 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 RPS20P21-201ENST00000466859 343 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.66□□□□□ -1.98
CKS1BP61024 RN7SL604P-201ENST00000492589 296 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 AC008638.1-201ENST00000506035 866 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 AC093824.1-201ENST00000508796 343 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.66□□□□□ -1.98
CKS1BP61024 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.66□□□□□ -1.98
CKS1BP61024 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.66□□□□□ -1.98
CKS1BP61024 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CKS1BP61024 SS18L2P2-201ENST00000583960 235 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC2.66□□□□□ -1.98
CKS1BP61024 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 AC069304.3-201ENST00000603938 1084 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 HMGN2P28-201ENST00000606102 262 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 AL049539.1-201ENST00000611964 459 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CKS1BP61024 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.66□□□□□ -1.98
CKS1BP61024 AL137100.1-201ENST00000556703 1620 ntBASIC2.66□□□□□ -1.98
CKS1BP61024 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CKS1BP61024 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CKS1BP61024 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.66□□□□□ -1.98
CKS1BP61024 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CKS1BP61024 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CKS1BP61024 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CKS1BP61024 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CKS1BP61024 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CKS1BP61024 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CKS1BP61024 RNU1-75P-201ENST00000347264 129 ntBASIC2.65□□□□□ -1.99
CKS1BP61024 MIR148B-201ENST00000362252 99 ntBASIC2.65□□□□□ -1.99
CKS1BP61024 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CKS1BP61024 SNORA26.7-201ENST00000391288 122 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms