Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CENPFP49454 AC139713.2-215ENST00000641428 5037 ntBASIC3.63□□□□□ -1.83
CENPFP49454 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CENPFP49454 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.63□□□□□ -1.83
CENPFP49454 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CENPFP49454 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CENPFP49454 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CENPFP49454 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.63□□□□□ -1.83
CENPFP49454 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
CENPFP49454 AC019097.1-201ENST00000424783 735 ntBASIC3.63□□□□□ -1.83
CENPFP49454 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPFP49454 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPFP49454 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CENPFP49454 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CENPFP49454 AC090971.4-201ENST00000560291 1800 ntBASIC3.63□□□□□ -1.83
CENPFP49454 RIOK3P1-201ENST00000418778 1528 ntBASIC3.63□□□□□ -1.83
CENPFP49454 SNORA18.3-201ENST00000384122 132 ntBASIC3.63□□□□□ -1.83
CENPFP49454 RN7SKP209-201ENST00000516888 304 ntBASIC3.63□□□□□ -1.83
CENPFP49454 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.63□□□□□ -1.83
CENPFP49454 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.63□□□□□ -1.83
CENPFP49454 DUXAP6-201ENST00000553858 601 ntBASIC3.63□□□□□ -1.83
CENPFP49454 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.63□□□□□ -1.83
CENPFP49454 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.62□□□□□ -1.83
CENPFP49454 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CENPFP49454 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CENPFP49454 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CENPFP49454 SNORD67-201ENST00000390833 111 ntBASIC3.62□□□□□ -1.83
CENPFP49454 AL136097.1-201ENST00000456945 913 ntBASIC3.62□□□□□ -1.83
CENPFP49454 DPPA3P2-201ENST00000553589 478 ntBASIC3.62□□□□□ -1.83
CENPFP49454 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CENPFP49454 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CENPFP49454 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CENPFP49454 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.62□□□□□ -1.83
CENPFP49454 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CENPFP49454 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.62□□□□□ -1.83
CENPFP49454 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.62□□□□□ -1.83
CENPFP49454 AC234778.2-201ENST00000566241 354 ntBASIC3.62□□□□□ -1.83
CENPFP49454 HMGB1P6-201ENST00000569046 646 ntBASIC3.62□□□□□ -1.83
CENPFP49454 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.62□□□□□ -1.83
CENPFP49454 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.62□□□□□ -1.83
CENPFP49454 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.62□□□□□ -1.83
CENPFP49454 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.62□□□□□ -1.83
CENPFP49454 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CENPFP49454 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CENPFP49454 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.61□□□□□ -1.83
CENPFP49454 ATP5F1P6-201ENST00000402768 767 ntBASIC3.61□□□□□ -1.83
CENPFP49454 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.61□□□□□ -1.83
CENPFP49454 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.61□□□□□ -1.83
CENPFP49454 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CENPFP49454 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 AC104446.1-201ENST00000613728 1321 ntBASIC3.61□□□□□ -1.83
CENPFP49454 AC009963.1-201ENST00000417265 157 ntBASIC3.61□□□□□ -1.83
CENPFP49454 AC096638.2-201ENST00000434965 711 ntBASIC3.61□□□□□ -1.83
CENPFP49454 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.61□□□□□ -1.83
CENPFP49454 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.61□□□□□ -1.83
CENPFP49454 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 SETP12-201ENST00000514068 805 ntBASIC3.61□□□□□ -1.83
CENPFP49454 AP002404.1-201ENST00000532005 451 ntBASIC3.61□□□□□ -1.83
CENPFP49454 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.61□□□□□ -1.83
CENPFP49454 AP004607.9-201ENST00000618202 316 ntBASIC3.61□□□□□ -1.83
CENPFP49454 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC3.61□□□□□ -1.83
CENPFP49454 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CENPFP49454 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CENPFP49454 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CENPFP49454 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.61□□□□□ -1.83
CENPFP49454 SEPT7P8-201ENST00000413308 775 ntBASIC3.61□□□□□ -1.83
CENPFP49454 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.61□□□□□ -1.83
CENPFP49454 AC018552.3-201ENST00000567416 561 ntBASIC3.61□□□□□ -1.83
CENPFP49454 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.61□□□□□ -1.83
CENPFP49454 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.61□□□□□ -1.83
CENPFP49454 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.61□□□□□ -1.83
CENPFP49454 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CENPFP49454 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CENPFP49454 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CENPFP49454 Y_RNA.226-201ENST00000364337 114 ntBASIC3.6□□□□□ -1.83
CENPFP49454 AL513174.1-201ENST00000423182 629 ntBASIC3.6□□□□□ -1.83
CENPFP49454 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.6□□□□□ -1.83
CENPFP49454 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.6□□□□□ -1.83
CENPFP49454 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.6□□□□□ -1.83
CENPFP49454 AC006557.5-201ENST00000603126 811 ntBASIC3.6□□□□□ -1.83
CENPFP49454 AL590808.1-201ENST00000618696 141 ntBASIC3.6□□□□□ -1.83
CENPFP49454 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CENPFP49454 RSL24D1P4-201ENST00000400938 484 ntBASIC3.6□□□□□ -1.83
CENPFP49454 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.6□□□□□ -1.83
CENPFP49454 HIGD1AP12-201ENST00000427832 281 ntBASIC3.6□□□□□ -1.83
CENPFP49454 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.6□□□□□ -1.83
CENPFP49454 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC3.6□□□□□ -1.83
CENPFP49454 AL121766.1-201ENST00000547436 487 ntBASIC3.6□□□□□ -1.83
CENPFP49454 BRDTP1-201ENST00000605735 677 ntBASIC3.6□□□□□ -1.83
CENPFP49454 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CENPFP49454 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CENPFP49454 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.6□□□□□ -1.83
CENPFP49454 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CENPFP49454 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms