Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RN7SL600P-201ENST00000581811 299 ntBASIC4.16□□□□□ -1.74
SSR1P43307 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.16□□□□□ -1.74
SSR1P43307 MRPS35P3-201ENST00000603189 709 ntBASIC4.16□□□□□ -1.74
SSR1P43307 AC010435.1-201ENST00000623353 1177 ntBASIC4.16□□□□□ -1.74
SSR1P43307 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.16□□□□□ -1.74
SSR1P43307 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.16□□□□□ -1.74
SSR1P43307 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.16□□□□□ -1.74
SSR1P43307 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.16□□□□□ -1.74
SSR1P43307 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSR1P43307 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
SSR1P43307 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.16□□□□□ -1.74
SSR1P43307 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSR1P43307 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.16□□□□□ -1.74
SSR1P43307 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSR1P43307 SRP72P2-201ENST00000344851 1979 ntBASIC4.15□□□□□ -1.74
SSR1P43307 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.15□□□□□ -1.75
SSR1P43307 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSR1P43307 RNA5SP399-201ENST00000364003 117 ntBASIC4.15□□□□□ -1.75
SSR1P43307 RNA5SP130-201ENST00000364431 114 ntBASIC4.15□□□□□ -1.75
SSR1P43307 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSR1P43307 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSR1P43307 ENSAP1-201ENST00000392855 326 ntBASIC4.15□□□□□ -1.75
SSR1P43307 AL590704.1-201ENST00000402856 794 ntBASIC4.15□□□□□ -1.75
SSR1P43307 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 AC017079.2-201ENST00000416102 485 ntBASIC4.15□□□□□ -1.75
SSR1P43307 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 AL691449.1-201ENST00000426570 421 ntBASIC4.15□□□□□ -1.75
SSR1P43307 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.15□□□□□ -1.75
SSR1P43307 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.15□□□□□ -1.75
SSR1P43307 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 HMGB1P5-202ENST00000451497 985 ntBASIC4.15□□□□□ -1.75
SSR1P43307 RPS4XP13-201ENST00000483219 789 ntBASIC4.15□□□□□ -1.75
SSR1P43307 AC090543.1-201ENST00000492168 485 ntBASIC4.15□□□□□ -1.75
SSR1P43307 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.15□□□□□ -1.75
SSR1P43307 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 SYF2P1-201ENST00000550658 413 ntBASIC4.15□□□□□ -1.75
SSR1P43307 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSR1P43307 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.15□□□□□ -1.75
SSR1P43307 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
SSR1P43307 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.15□□□□□ -1.75
SSR1P43307 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSR1P43307 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSR1P43307 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SSR1P43307 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSR1P43307 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SSR1P43307 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.15□□□□□ -1.75
SSR1P43307 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSR1P43307 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SSR1P43307 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSR1P43307 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.14□□□□□ -1.75
SSR1P43307 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.14□□□□□ -1.75
SSR1P43307 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSR1P43307 OR4A15-201ENST00000314706 1035 ntBASIC4.14□□□□□ -1.75
SSR1P43307 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSR1P43307 RPL23AP47-201ENST00000408017 460 ntBASIC4.14□□□□□ -1.75
SSR1P43307 RN7SKP285-201ENST00000410137 318 ntBASIC4.14□□□□□ -1.75
SSR1P43307 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.14□□□□□ -1.75
SSR1P43307 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.14□□□□□ -1.75
SSR1P43307 AL590103.1-201ENST00000434488 307 ntBASIC4.14□□□□□ -1.75
SSR1P43307 MTCYBP12-201ENST00000440559 1134 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.14□□□□□ -1.75
SSR1P43307 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.14□□□□□ -1.75
SSR1P43307 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSR1P43307 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.14□□□□□ -1.75
SSR1P43307 RNU6-775P-201ENST00000459318 96 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AC010618.1-201ENST00000469924 477 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AC012181.1-201ENST00000479895 423 ntBASIC4.14□□□□□ -1.75
SSR1P43307 RPL31P13-201ENST00000484151 370 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AC110792.1-201ENST00000491826 472 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AL132838.2-201ENST00000492041 314 ntBASIC4.14□□□□□ -1.75
SSR1P43307 HPRT1P1-201ENST00000509498 657 ntBASIC4.14□□□□□ -1.75
SSR1P43307 RNA5SP179-201ENST00000517284 121 ntBASIC4.14□□□□□ -1.75
SSR1P43307 OR4A12P-201ENST00000530847 918 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AC091516.1-201ENST00000549191 703 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AL163153.1-201ENST00000554223 283 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.14□□□□□ -1.75
SSR1P43307 MIR548Y-201ENST00000582739 110 ntBASIC4.14□□□□□ -1.75
SSR1P43307 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSR1P43307 AC011492.1-201ENST00000600023 315 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AC091167.4-201ENST00000605079 184 ntBASIC4.14□□□□□ -1.75
SSR1P43307 BX322635.1-201ENST00000605804 496 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AC016877.3-201ENST00000606778 504 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AP004607.9-201ENST00000618202 316 ntBASIC4.14□□□□□ -1.75
SSR1P43307 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.14□□□□□ -1.75
SSR1P43307 AC018816.2-201ENST00000621460 353 ntBASIC4.14□□□□□ -1.75
SSR1P43307 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.14□□□□□ -1.75
SSR1P43307 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSR1P43307 BDP1P-201ENST00000582658 1990 ntBASIC4.14□□□□□ -1.75
SSR1P43307 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SSR1P43307 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSR1P43307 NCAPGP1-201ENST00000505112 1814 ntBASIC4.14□□□□□ -1.75
SSR1P43307 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSR1P43307 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSR1P43307 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms