Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNA5SP196-201ENST00000625967 102 ntBASIC3.84□□□□□ -1.79
SLC1A1P43005 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC1A1P43005 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC1A1P43005 PRO1804-201ENST00000623780 2050 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC1A1P43005 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC1A1P43005 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC1A1P43005 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC1A1P43005 RNA5SP283-201ENST00000365604 119 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 AC068538.1-201ENST00000376856 336 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SLC1A1P43005 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC1A1P43005 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC1A1P43005 PTP4A1P5-201ENST00000420305 455 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 RFESDP1-201ENST00000422350 461 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 AL645931.1-201ENST00000439737 410 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC1A1P43005 RPS20P21-201ENST00000466859 343 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 AC087385.1-201ENST00000475062 312 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 AC107398.1-201ENST00000486904 505 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 MTCO1P35-201ENST00000515270 228 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 IGKV2-23-201ENST00000518729 323 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.83□□□□□ -1.8
SLC1A1P43005 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC1A1P43005 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC1A1P43005 AC053481.4-201ENST00000583164 216 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 VN1R84P-201ENST00000593697 235 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 AP003117.1-201ENST00000602771 554 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 RNVU1-4-201ENST00000612985 164 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 MIR7973-1-201ENST00000614683 76 ntBASIC3.83□□□□□ -1.8
SLC1A1P43005 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC1A1P43005 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SLC1A1P43005 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC1A1P43005 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC1A1P43005 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC1A1P43005 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC1A1P43005 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
SLC1A1P43005 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC1A1P43005 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SLC1A1P43005 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC1A1P43005 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SLC1A1P43005 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SLC1A1P43005 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC1A1P43005 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC1A1P43005 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC1A1P43005 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SLC1A1P43005 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 RNU6-317P-201ENST00000384031 107 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 MIR30B-201ENST00000384850 88 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC1A1P43005 AC105402.1-201ENST00000413336 545 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 RPS27AP12-201ENST00000429552 465 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 AC009220.1-201ENST00000451614 275 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 AL133162.1-201ENST00000463228 453 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC1A1P43005 ACTG1P13-201ENST00000486987 1043 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 AC090543.1-201ENST00000492168 485 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC1A1P43005 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC1A1P43005 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC1A1P43005 AL049870.4-201ENST00000555741 486 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 AC087499.8-201ENST00000578406 226 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 MIR5047-201ENST00000579212 100 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC1A1P43005 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC1A1P43005 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC1A1P43005 AC009452.1-201ENST00000640823 606 ntBASIC3.82□□□□□ -1.8
SLC1A1P43005 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SLC1A1P43005 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SLC1A1P43005 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SLC1A1P43005 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC1A1P43005 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC1A1P43005 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
SLC1A1P43005 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 RNA5SP235-201ENST00000365411 114 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 U3.39-201ENST00000408569 239 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC1A1P43005 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.81□□□□□ -1.8
SLC1A1P43005 AL445528.1-201ENST00000426330 420 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AL160175.1-201ENST00000428124 247 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AC074367.1-201ENST00000438685 1125 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC1A1P43005 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC1A1P43005 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC1A1P43005 HMGB1P5-202ENST00000451497 985 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 AL049830.2-201ENST00000480072 201 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 SUMO1P1-201ENST00000497904 306 ntBASIC3.81□□□□□ -1.8
SLC1A1P43005 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms