Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGA1P17096 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
HMGA1P17096 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGA1P17096 NAMPTP1-201ENST00000440465 2514 ntBASIC3.45□□□□□ -1.86
HMGA1P17096 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGA1P17096 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGA1P17096 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HMGA1P17096 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGA1P17096 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HMGA1P17096 TTC39DP-201ENST00000416781 1688 ntBASIC3.44□□□□□ -1.86
HMGA1P17096 MTCO1P46-201ENST00000451639 1491 ntBASIC3.44□□□□□ -1.86
HMGA1P17096 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HMGA1P17096 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
HMGA1P17096 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGA1P17096 AL365396.1-201ENST00000430854 671 ntBASIC3.44□□□□□ -1.86
HMGA1P17096 AL353705.1-201ENST00000433468 480 ntBASIC3.44□□□□□ -1.86
HMGA1P17096 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGA1P17096 AL450263.2-201ENST00000439400 589 ntBASIC3.44□□□□□ -1.86
HMGA1P17096 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.44□□□□□ -1.86
HMGA1P17096 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGA1P17096 AL133477.1-201ENST00000457472 514 ntBASIC3.44□□□□□ -1.86
HMGA1P17096 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGA1P17096 AL136126.1-201ENST00000473603 402 ntBASIC3.44□□□□□ -1.86
HMGA1P17096 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGA1P17096 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGA1P17096 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGA1P17096 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.44□□□□□ -1.86
HMGA1P17096 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGA1P17096 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.44□□□□□ -1.86
HMGA1P17096 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HMGA1P17096 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HMGA1P17096 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HMGA1P17096 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGA1P17096 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGA1P17096 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGA1P17096 MTCO1P22-201ENST00000604619 1360 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGA1P17096 AC005332.5-201ENST00000591222 2919 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGA1P17096 SNORA48.5-201ENST00000391143 135 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 NDUFB4P4-201ENST00000404822 243 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 RN7SKP247-201ENST00000411094 308 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGA1P17096 AL671855.1-201ENST00000446875 1203 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 RPL23AP67-201ENST00000465341 474 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 AC109925.1-201ENST00000478069 331 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGA1P17096 GOLGA5P1-201ENST00000507317 980 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 AC016550.3-201ENST00000515706 767 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGA1P17096 AC018442.3-201ENST00000523025 183 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HMGA1P17096 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGA1P17096 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.43□□□□□ -1.86
HMGA1P17096 AC015917.1-201ENST00000579654 510 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 AC124312.4-201ENST00000605533 310 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 uc_338.32-201ENST00000615087 172 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGA1P17096 AC017071.1-201ENST00000564407 2204 ntBASIC3.43□□□□□ -1.86
HMGA1P17096 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HMGA1P17096 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGA1P17096 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HMGA1P17096 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGA1P17096 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGA1P17096 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGA1P17096 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
HMGA1P17096 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGA1P17096 GSTA8P-201ENST00000404253 637 ntBASIC3.42□□□□□ -1.86
HMGA1P17096 LIPT1P1-201ENST00000415870 1186 ntBASIC3.42□□□□□ -1.86
HMGA1P17096 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGA1P17096 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGA1P17096 AL158071.1-201ENST00000430315 461 ntBASIC3.42□□□□□ -1.86
HMGA1P17096 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGA1P17096 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGA1P17096 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGA1P17096 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGA1P17096 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGA1P17096 RPS3AP43-201ENST00000479743 781 ntBASIC3.42□□□□□ -1.86
HMGA1P17096 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGA1P17096 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGA1P17096 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGA1P17096 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGA1P17096 CYP2C60P-201ENST00000566088 139 ntBASIC3.42□□□□□ -1.86
HMGA1P17096 MIR2682-201ENST00000580305 110 ntBASIC3.42□□□□□ -1.86
HMGA1P17096 MIR4325-201ENST00000583049 90 ntBASIC3.42□□□□□ -1.86
HMGA1P17096 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGA1P17096 AF131215.7-201ENST00000602443 707 ntBASIC3.42□□□□□ -1.86
HMGA1P17096 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HMGA1P17096 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGA1P17096 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGA1P17096 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGA1P17096 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HMGA1P17096 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
HMGA1P17096 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HMGA1P17096 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HMGA1P17096 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA1P17096 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGA1P17096 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 RAC1P3-201ENST00000416129 580 ntBASIC3.41□□□□□ -1.86
HMGA1P17096 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms