Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC004943.3-201ENST00000624116 600 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.17□□□□□ -1.9
CTLA4P16410 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
CTLA4P16410 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTLA4P16410 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.17□□□□□ -1.9
CTLA4P16410 AC025125.1-201ENST00000624743 1922 ntBASIC3.17□□□□□ -1.9
CTLA4P16410 HSPA8P1-201ENST00000425843 1833 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AC006042.3-201ENST00000454684 1469 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTLA4P16410 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTLA4P16410 RNF6P1-201ENST00000444889 1784 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTLA4P16410 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CTLA4P16410 RNU6-386P-201ENST00000362650 107 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 RNU1-87P-201ENST00000363727 170 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 RN7SKP280-201ENST00000364196 304 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 RNA5SP51-201ENST00000364750 119 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTLA4P16410 SNORD3H-201ENST00000384486 214 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.16□□□□□ -1.9
CTLA4P16410 MTND4P11-201ENST00000417020 1058 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.16□□□□□ -1.9
CTLA4P16410 AJ239321.1-201ENST00000424255 564 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 MTCO1P45-201ENST00000431457 267 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.16□□□□□ -1.9
CTLA4P16410 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.16□□□□□ -1.9
CTLA4P16410 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.16□□□□□ -1.9
CTLA4P16410 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.16□□□□□ -1.9
CTLA4P16410 AC087385.1-201ENST00000475062 312 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.16□□□□□ -1.9
CTLA4P16410 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.16□□□□□ -1.9
CTLA4P16410 FTH1P24-201ENST00000503502 462 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.16□□□□□ -1.9
CTLA4P16410 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.16□□□□□ -1.9
CTLA4P16410 AC026784.1-201ENST00000507986 352 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AC147055.1-201ENST00000509261 750 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 PCBP2P3-201ENST00000509726 843 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTLA4P16410 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.16□□□□□ -1.9
CTLA4P16410 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.16□□□□□ -1.9
CTLA4P16410 FTH1P9-201ENST00000513251 355 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 RNA5SP309-201ENST00000516670 106 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AP000926.4-201ENST00000527351 454 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.16□□□□□ -1.9
CTLA4P16410 AC008083.2-201ENST00000546707 476 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AC084824.1-201ENST00000550917 1005 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.16□□□□□ -1.9
CTLA4P16410 BNIP3P38-201ENST00000601117 544 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AC107905.1-201ENST00000616204 426 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 AC022149.2-201ENST00000621061 203 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTLA4P16410 AC007823.1-201ENST00000569932 1566 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 DCAF13P3-201ENST00000561147 1334 ntBASIC3.16□□□□□ -1.9
CTLA4P16410 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CTLA4P16410 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTLA4P16410 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.15□□□□□ -1.9
CTLA4P16410 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CTLA4P16410 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.15□□□□□ -1.9
CTLA4P16410 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.15□□□□□ -1.91
CTLA4P16410 RNU6-666P-201ENST00000363499 107 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 RNA5SP479-201ENST00000364858 117 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.15□□□□□ -1.91
CTLA4P16410 AC136624.1-201ENST00000400791 413 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 AC127526.1-201ENST00000417526 366 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 AL158071.1-201ENST00000430315 461 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTLA4P16410 EXTL2P1-201ENST00000446218 416 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 CDH12P2-201ENST00000504393 298 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.15□□□□□ -1.91
CTLA4P16410 RNU2-27P-201ENST00000516185 142 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
CTLA4P16410 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.15□□□□□ -1.91
CTLA4P16410 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 AC092851.1-201ENST00000535964 478 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 AC026333.2-201ENST00000542164 106 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 DUXAP6-201ENST00000553858 601 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 MIR4644-201ENST00000579929 84 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 NF1P5-201ENST00000588287 448 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 AL451086.1-201ENST00000605596 223 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTLA4P16410 RNVU1-4-201ENST00000612985 164 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 AC069209.1-201ENST00000619282 651 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 C2orf27A-204ENST00000623058 969 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 AP003355.3-201ENST00000623465 114 ntBASIC3.15□□□□□ -1.91
CTLA4P16410 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTLA4P16410 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CTLA4P16410 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.15□□□□□ -1.91
CTLA4P16410 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CTLA4P16410 AL353746.1-201ENST00000566293 6881 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms