Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CFTRP13569 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.61□□□□□ -1.51
CFTRP13569 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.61□□□□□ -1.51
CFTRP13569 AC087888.1-201ENST00000550884 1254 ntBASIC5.61□□□□□ -1.51
CFTRP13569 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.61□□□□□ -1.51
CFTRP13569 AL162713.1-201ENST00000604480 262 ntBASIC5.61□□□□□ -1.51
CFTRP13569 AC245100.7-201ENST00000609678 442 ntBASIC5.61□□□□□ -1.51
CFTRP13569 AC083843.2-201ENST00000568248 6253 ntBASIC5.61□□□□□ -1.51
CFTRP13569 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CFTRP13569 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CFTRP13569 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.61□□□□□ -1.51
CFTRP13569 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CFTRP13569 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.61□□□□□ -1.51
CFTRP13569 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CFTRP13569 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CFTRP13569 AC062016.1-201ENST00000355719 319 ntBASIC5.6□□□□□ -1.51
CFTRP13569 HSPE1P8-201ENST00000406997 288 ntBASIC5.6□□□□□ -1.51
CFTRP13569 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.6□□□□□ -1.51
CFTRP13569 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CFTRP13569 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CFTRP13569 RPL23AP73-201ENST00000492507 471 ntBASIC5.6□□□□□ -1.51
CFTRP13569 snoU109.6-201ENST00000516831 118 ntBASIC5.6□□□□□ -1.51
CFTRP13569 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.6□□□□□ -1.51
CFTRP13569 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.6□□□□□ -1.51
CFTRP13569 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC5.6□□□□□ -1.51
CFTRP13569 UBL5P2-201ENST00000583788 219 ntBASIC5.6□□□□□ -1.51
CFTRP13569 AC103881.1-201ENST00000603476 538 ntBASIC5.6□□□□□ -1.51
CFTRP13569 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.6□□□□□ -1.51
CFTRP13569 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC5.6□□□□□ -1.51
CFTRP13569 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.6□□□□□ -1.51
CFTRP13569 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CFTRP13569 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.6□□□□□ -1.51
CFTRP13569 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.6□□□□□ -1.51
CFTRP13569 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CFTRP13569 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CFTRP13569 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CFTRP13569 JKAMPP1-201ENST00000413804 919 ntBASIC5.59□□□□□ -1.51
CFTRP13569 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.59□□□□□ -1.51
CFTRP13569 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.59□□□□□ -1.51
CFTRP13569 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.59□□□□□ -1.51
CFTRP13569 GTF3AP2-201ENST00000557014 266 ntBASIC5.59□□□□□ -1.51
CFTRP13569 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.59□□□□□ -1.51
CFTRP13569 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CFTRP13569 AL645568.2-201ENST00000432815 1337 ntBASIC5.59□□□□□ -1.51
CFTRP13569 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CFTRP13569 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.59□□□□□ -1.51
CFTRP13569 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFTRP13569 MIR93-201ENST00000385024 80 ntBASIC5.58□□□□□ -1.52
CFTRP13569 AC000041.1-201ENST00000439655 175 ntBASIC5.58□□□□□ -1.52
CFTRP13569 AL135938.1-201ENST00000443141 297 ntBASIC5.58□□□□□ -1.52
CFTRP13569 ELOCP23-201ENST00000452014 332 ntBASIC5.58□□□□□ -1.52
CFTRP13569 MRPL35P4-201ENST00000453682 566 ntBASIC5.58□□□□□ -1.52
CFTRP13569 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.58□□□□□ -1.52
CFTRP13569 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.58□□□□□ -1.52
CFTRP13569 RNA5SP154-201ENST00000516193 111 ntBASIC5.58□□□□□ -1.52
CFTRP13569 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.58□□□□□ -1.52
CFTRP13569 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CFTRP13569 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.58□□□□□ -1.52
CFTRP13569 AL162574.2-201ENST00000614618 657 ntBASIC5.58□□□□□ -1.52
CFTRP13569 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.58□□□□□ -1.52
CFTRP13569 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFTRP13569 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.58□□□□□ -1.52
CFTRP13569 RIOK3P1-201ENST00000418778 1528 ntBASIC5.58□□□□□ -1.52
CFTRP13569 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.58□□□□□ -1.52
CFTRP13569 OR51C1P-202ENST00000641159 1444 ntBASIC5.58□□□□□ -1.52
CFTRP13569 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CFTRP13569 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CFTRP13569 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFTRP13569 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.58□□□□□ -1.52
CFTRP13569 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.58□□□□□ -1.52
CFTRP13569 RPS26P47-201ENST00000427219 348 ntBASIC5.58□□□□□ -1.52
CFTRP13569 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CFTRP13569 RPS26P3-201ENST00000470205 348 ntBASIC5.58□□□□□ -1.52
CFTRP13569 RPL21P6-201ENST00000479171 504 ntBASIC5.58□□□□□ -1.52
CFTRP13569 AC004057.1-201ENST00000485827 348 ntBASIC5.58□□□□□ -1.52
CFTRP13569 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.58□□□□□ -1.52
CFTRP13569 AC026801.2-201ENST00000515352 425 ntBASIC5.58□□□□□ -1.52
CFTRP13569 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.58□□□□□ -1.52
CFTRP13569 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.58□□□□□ -1.52
CFTRP13569 AL672296.1-201ENST00000427780 2158 ntBASIC5.57□□□□□ -1.52
CFTRP13569 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CFTRP13569 AC006504.1-201ENST00000562493 3666 ntBASIC5.57□□□□□ -1.52
CFTRP13569 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CFTRP13569 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
CFTRP13569 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFTRP13569 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.57□□□□□ -1.52
CFTRP13569 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.57□□□□□ -1.52
CFTRP13569 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
CFTRP13569 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.57□□□□□ -1.52
CFTRP13569 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CFTRP13569 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CFTRP13569 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CFTRP13569 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.56□□□□□ -1.52
CFTRP13569 OR5BR1P-201ENST00000524992 1330 ntBASIC5.56□□□□□ -1.52
CFTRP13569 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFTRP13569 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CFTRP13569 HMGN2P8-201ENST00000391458 268 ntBASIC5.56□□□□□ -1.52
CFTRP13569 RN7SKP220-201ENST00000410611 288 ntBASIC5.56□□□□□ -1.52
CFTRP13569 OOSP1P1-201ENST00000423265 274 ntBASIC5.56□□□□□ -1.52
CFTRP13569 USP12PY-201ENST00000427677 1064 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms