Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 RPS3AP14-201ENST00000483907 780 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC007686.1-201ENST00000488511 463 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC092490.3-201ENST00000545370 572 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AL358913.1-201ENST00000554342 121 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC015917.1-201ENST00000579654 510 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 MIR3662-201ENST00000637030 95 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC022164.1-201ENST00000568767 2673 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC134882.1-201ENST00000603738 1676 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 SNRPEP3-201ENST00000338402 276 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC025750.1-201ENST00000399891 379 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 OR4K12P-201ENST00000406538 961 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 RNU2-28P-201ENST00000410457 189 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC211486.3-201ENST00000412694 621 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 RPS3AP9-201ENST00000417027 792 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AL049745.1-201ENST00000433953 286 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 MRPS21P3-201ENST00000436696 262 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AL033528.1-201ENST00000453780 140 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC105914.1-201ENST00000511798 226 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 RNU6-488P-201ENST00000515918 99 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 RN7SKP147-201ENST00000517154 244 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 ARL2BPP5-201ENST00000523141 481 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 OR5M7P-201ENST00000526140 972 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 PMS2P3-207ENST00000529061 717 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AL157687.1-201ENST00000554853 619 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC087477.6-201ENST00000559595 843 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 MIR3934-201ENST00000579806 107 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 MEMO1P5-201ENST00000604810 406 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC092162.3-201ENST00000624511 1624 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC079097.1-201ENST00000512187 1399 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 TCP11X1-202ENST00000622971 1372 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC117529.2-201ENST00000512159 2068 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 AC005725.1-201ENST00000577346 2607 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 LINC00561-201ENST00000565815 2738 ntBASIC7.29□□□□□ -1.24
CSB-PGBD3P0DP91 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 RNU6-877P-201ENST00000383868 107 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 Y_RNA.419-201ENST00000384041 102 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 USP9YP27-201ENST00000418455 438 ntBASIC7.28□□□□□ -1.24
CSB-PGBD3P0DP91 RPS27AP14-201ENST00000422868 454 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms