Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
MMP3P08254 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
MMP3P08254 SNORA62.3-201ENST00000365110 153 ntBASIC4.7□□□□□ -1.66
MMP3P08254 SNORD116.1-201ENST00000365628 92 ntBASIC4.7□□□□□ -1.66
MMP3P08254 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP3P08254 RNA5SP171-201ENST00000391071 115 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP3P08254 RN7SKP167-201ENST00000411047 285 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AC092745.2-202ENST00000411880 369 ntBASIC4.7□□□□□ -1.66
MMP3P08254 CTSL3P-202ENST00000412179 788 ntBASIC4.7□□□□□ -1.66
MMP3P08254 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.7□□□□□ -1.66
MMP3P08254 RPL7P2-201ENST00000427639 268 ntBASIC4.7□□□□□ -1.66
MMP3P08254 HIGD1AP4-201ENST00000430194 280 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.7□□□□□ -1.66
MMP3P08254 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 TMX2P1-201ENST00000436507 708 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AP000936.3-201ENST00000438127 255 ntBASIC4.7□□□□□ -1.66
MMP3P08254 RPL23AP46-201ENST00000438548 490 ntBASIC4.7□□□□□ -1.66
MMP3P08254 FGF7P5-201ENST00000441829 291 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AL035551.1-201ENST00000446931 348 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AL031584.1-201ENST00000447169 754 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.7□□□□□ -1.66
MMP3P08254 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.7□□□□□ -1.66
MMP3P08254 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP3P08254 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.7□□□□□ -1.66
MMP3P08254 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.7□□□□□ -1.66
MMP3P08254 RN7SL542P-201ENST00000467147 294 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.7□□□□□ -1.66
MMP3P08254 RN7SL132P-201ENST00000478131 296 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AC004263.1-201ENST00000479327 332 ntBASIC4.7□□□□□ -1.66
MMP3P08254 RPS29P19-201ENST00000479709 171 ntBASIC4.7□□□□□ -1.66
MMP3P08254 RPL23AP44-201ENST00000482216 473 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AC090013.1-201ENST00000485147 480 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AP000563.1-201ENST00000490865 758 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AC084024.2-201ENST00000503480 791 ntBASIC4.7□□□□□ -1.66
MMP3P08254 NDUFB4P12-201ENST00000513465 390 ntBASIC4.7□□□□□ -1.66
MMP3P08254 SNORA67.7-201ENST00000516664 135 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.7□□□□□ -1.66
MMP3P08254 DUXAP6-201ENST00000553858 601 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.7□□□□□ -1.66
MMP3P08254 AC022655.2-201ENST00000577280 318 ntBASIC4.7□□□□□ -1.66
MMP3P08254 MIR5708-201ENST00000579723 85 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP3P08254 AC021171.1-201ENST00000603137 706 ntBASIC4.7□□□□□ -1.66
MMP3P08254 AP000238.1-201ENST00000608759 426 ntBASIC4.7□□□□□ -1.66
MMP3P08254 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP3P08254 MIR7151-201ENST00000617477 60 ntBASIC4.7□□□□□ -1.66
MMP3P08254 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
MMP3P08254 AP002967.1-201ENST00000624203 539 ntBASIC4.7□□□□□ -1.66
MMP3P08254 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
MMP3P08254 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 CASC19-284ENST00000642142 1868 ntBASIC4.7□□□□□ -1.66
MMP3P08254 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 RNF6P1-201ENST00000444889 1784 ntBASIC4.7□□□□□ -1.66
MMP3P08254 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.7□□□□□ -1.66
MMP3P08254 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP3P08254 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
MMP3P08254 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP3P08254 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MMP3P08254 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP3P08254 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MMP3P08254 MIR525-201ENST00000384978 85 ntBASIC4.69□□□□□ -1.66
MMP3P08254 MIR670-201ENST00000390142 98 ntBASIC4.69□□□□□ -1.66
MMP3P08254 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MMP3P08254 SNORD66.1-201ENST00000391230 76 ntBASIC4.69□□□□□ -1.66
MMP3P08254 SNORA68.2-201ENST00000391263 128 ntBASIC4.69□□□□□ -1.66
MMP3P08254 CYCSP19-201ENST00000411715 316 ntBASIC4.69□□□□□ -1.66
MMP3P08254 TPT1P2-201ENST00000413105 503 ntBASIC4.69□□□□□ -1.66
MMP3P08254 OR8F1P-201ENST00000425243 930 ntBASIC4.69□□□□□ -1.66
MMP3P08254 RPS29P7-201ENST00000439662 171 ntBASIC4.69□□□□□ -1.66
MMP3P08254 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.69□□□□□ -1.66
MMP3P08254 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP3P08254 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP3P08254 AC112206.1-201ENST00000468416 477 ntBASIC4.69□□□□□ -1.66
MMP3P08254 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MMP3P08254 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP3P08254 AC108022.1-201ENST00000493466 478 ntBASIC4.69□□□□□ -1.66
MMP3P08254 AC104164.2-201ENST00000496953 495 ntBASIC4.69□□□□□ -1.66
MMP3P08254 HPRT1P2-201ENST00000505250 544 ntBASIC4.69□□□□□ -1.66
MMP3P08254 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP3P08254 AC010460.1-201ENST00000507087 466 ntBASIC4.69□□□□□ -1.66
MMP3P08254 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP3P08254 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP3P08254 RNU1-45P-201ENST00000517191 141 ntBASIC4.69□□□□□ -1.66
MMP3P08254 AP002812.4-201ENST00000532139 286 ntBASIC4.69□□□□□ -1.66
MMP3P08254 POLR2KP1-201ENST00000553226 168 ntBASIC4.69□□□□□ -1.66
MMP3P08254 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP3P08254 AC009094.1-201ENST00000564443 426 ntBASIC4.69□□□□□ -1.66
MMP3P08254 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP3P08254 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP3P08254 MIR3158-1-201ENST00000583596 81 ntBASIC4.69□□□□□ -1.66
MMP3P08254 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.69□□□□□ -1.66
MMP3P08254 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.69□□□□□ -1.66
MMP3P08254 AC016877.3-201ENST00000606778 504 ntBASIC4.69□□□□□ -1.66
MMP3P08254 uc_338.9-201ENST00000617424 182 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms