Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RB1P06400 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.6□□□□□ -1.67
RB1P06400 PRELID3BP11-201ENST00000414230 479 ntBASIC4.6□□□□□ -1.67
RB1P06400 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.6□□□□□ -1.67
RB1P06400 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.6□□□□□ -1.67
RB1P06400 AC027644.1-201ENST00000419595 298 ntBASIC4.6□□□□□ -1.67
RB1P06400 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.6□□□□□ -1.67
RB1P06400 RPL37P1-201ENST00000432310 284 ntBASIC4.6□□□□□ -1.67
RB1P06400 AC023347.2-201ENST00000433994 462 ntBASIC4.6□□□□□ -1.67
RB1P06400 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.6□□□□□ -1.67
RB1P06400 HMGB1P48-201ENST00000446155 598 ntBASIC4.6□□□□□ -1.67
RB1P06400 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.6□□□□□ -1.67
RB1P06400 RPL23AP2-201ENST00000471227 466 ntBASIC4.6□□□□□ -1.67
RB1P06400 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.6□□□□□ -1.67
RB1P06400 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.6□□□□□ -1.67
RB1P06400 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.6□□□□□ -1.67
RB1P06400 AC093752.1-206ENST00000511823 336 ntBASIC4.6□□□□□ -1.67
RB1P06400 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.6□□□□□ -1.67
RB1P06400 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.6□□□□□ -1.67
RB1P06400 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.6□□□□□ -1.67
RB1P06400 RN7SL703P-201ENST00000578485 302 ntBASIC4.6□□□□□ -1.67
RB1P06400 BPTFP1-201ENST00000579209 492 ntBASIC4.6□□□□□ -1.67
RB1P06400 AP001542.2-201ENST00000593141 364 ntBASIC4.6□□□□□ -1.67
RB1P06400 AC096947.1-201ENST00000603233 470 ntBASIC4.6□□□□□ -1.67
RB1P06400 AC112220.2-201ENST00000605513 533 ntBASIC4.6□□□□□ -1.67
RB1P06400 AC090912.3-201ENST00000609775 533 ntBASIC4.6□□□□□ -1.67
RB1P06400 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.6□□□□□ -1.67
RB1P06400 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RB1P06400 SGO1P1-201ENST00000603525 1447 ntBASIC4.6□□□□□ -1.67
RB1P06400 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.6□□□□□ -1.67
RB1P06400 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
RB1P06400 NXPH1-205ENST00000602349 1953 ntBASIC4.6□□□□□ -1.67
RB1P06400 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RB1P06400 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RB1P06400 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RB1P06400 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RB1P06400 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RB1P06400 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.59□□□□□ -1.67
RB1P06400 MIR16-1-201ENST00000385271 89 ntBASIC4.59□□□□□ -1.67
RB1P06400 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
RB1P06400 MTCO2P31-201ENST00000402702 684 ntBASIC4.59□□□□□ -1.67
RB1P06400 PRRC2CP1-201ENST00000404428 159 ntBASIC4.59□□□□□ -1.67
RB1P06400 SNORA11.1-201ENST00000408133 129 ntBASIC4.59□□□□□ -1.67
RB1P06400 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.59□□□□□ -1.67
RB1P06400 RNU6-272P-201ENST00000411028 104 ntBASIC4.59□□□□□ -1.67
RB1P06400 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.59□□□□□ -1.67
RB1P06400 MTND4P3-201ENST00000417829 541 ntBASIC4.59□□□□□ -1.67
RB1P06400 AC007529.1-201ENST00000418574 2178 ntBASIC4.59□□□□□ -1.67
RB1P06400 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.59□□□□□ -1.67
RB1P06400 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RB1P06400 RPL23AP25-201ENST00000430973 463 ntBASIC4.59□□□□□ -1.67
RB1P06400 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.59□□□□□ -1.67
RB1P06400 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RB1P06400 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.59□□□□□ -1.67
RB1P06400 AL645638.1-201ENST00000440519 361 ntBASIC4.59□□□□□ -1.67
RB1P06400 MTCO1P53-201ENST00000441633 699 ntBASIC4.59□□□□□ -1.67
RB1P06400 AC004865.1-201ENST00000442276 1003 ntBASIC4.59□□□□□ -1.67
RB1P06400 AL358794.1-201ENST00000445689 381 ntBASIC4.59□□□□□ -1.67
RB1P06400 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.59□□□□□ -1.67
RB1P06400 HMGB3P21-201ENST00000452483 547 ntBASIC4.59□□□□□ -1.67
RB1P06400 AC126121.1-201ENST00000482313 553 ntBASIC4.59□□□□□ -1.67
RB1P06400 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RB1P06400 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RB1P06400 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RB1P06400 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.59□□□□□ -1.67
RB1P06400 RPL7L1P13-201ENST00000511702 739 ntBASIC4.59□□□□□ -1.67
RB1P06400 FTH1P21-201ENST00000512179 511 ntBASIC4.59□□□□□ -1.67
RB1P06400 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.59□□□□□ -1.67
RB1P06400 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RB1P06400 AP001207.2-201ENST00000519490 539 ntBASIC4.59□□□□□ -1.67
RB1P06400 AF279873.1-201ENST00000523393 313 ntBASIC4.59□□□□□ -1.67
RB1P06400 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.59□□□□□ -1.67
RB1P06400 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.59□□□□□ -1.67
RB1P06400 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.59□□□□□ -1.67
RB1P06400 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.59□□□□□ -1.67
RB1P06400 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.59□□□□□ -1.67
RB1P06400 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.59□□□□□ -1.67
RB1P06400 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.59□□□□□ -1.67
RB1P06400 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.59□□□□□ -1.67
RB1P06400 AP004247.3-201ENST00000608682 624 ntBASIC4.59□□□□□ -1.67
RB1P06400 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.59□□□□□ -1.67
RB1P06400 CYCSP41-201ENST00000616920 296 ntBASIC4.59□□□□□ -1.67
RB1P06400 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RB1P06400 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
RB1P06400 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RB1P06400 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.59□□□□□ -1.67
RB1P06400 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.59□□□□□ -1.67
RB1P06400 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
RB1P06400 AP001273.1-201ENST00000624493 3152 ntBASIC4.59□□□□□ -1.68
RB1P06400 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RB1P06400 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.58□□□□□ -1.68
RB1P06400 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RB1P06400 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RB1P06400 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RB1P06400 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RB1P06400 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RB1P06400 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RB1P06400 RNU1-87P-201ENST00000363727 170 ntBASIC4.58□□□□□ -1.68
RB1P06400 OR1L1-202ENST00000373686 1083 ntBASIC4.58□□□□□ -1.68
RB1P06400 MIR449B-201ENST00000384995 97 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms