Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 OR2L1P-202ENST00000641567 1023 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOAP06340 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOAP06340 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOAP06340 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOAP06340 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 SEC63P2-201ENST00000503863 1939 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AL391994.1-201ENST00000254724 282 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 METTL21EP-201ENST00000298105 713 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 IL6STP1-201ENST00000346911 1020 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 RNU1-130P-201ENST00000363930 160 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 UBBP2-201ENST00000376781 231 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 RNU6-185P-201ENST00000384421 107 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 RNU6-920P-201ENST00000410926 92 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 SNRPFP1-201ENST00000414761 252 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 PTP4A1P1-201ENST00000420539 515 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 MTND1P4-201ENST00000435196 415 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 CACYBPP1-201ENST00000438592 684 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AL929288.2-201ENST00000446368 407 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 MTND4P18-201ENST00000447010 465 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 RPL21P134-201ENST00000453468 483 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 RNA5SP497-201ENST00000516081 97 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC060788.1-201ENST00000521318 469 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC138832.1-201ENST00000522871 556 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AP000619.3-201ENST00000535634 1127 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 PSMB7P1-201ENST00000556349 514 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 MIR3138-201ENST00000585238 82 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC008759.1-201ENST00000589783 983 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC022146.1-201ENST00000595307 847 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 VN1R88P-201ENST00000596787 292 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AC125494.3-201ENST00000602759 455 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 BPIFA4P-203ENST00000603168 689 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 ARF4P1-201ENST00000605447 541 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOAP06340 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AP000843.1-201ENST00000624880 701 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 MFSD8-245ENST00000641743 948 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 AP005901.5-201ENST00000545779 1796 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOAP06340 GTF2H2B-203ENST00000508065 1432 ntBASIC5.31□□□□□ -1.56
HLA-DOAP06340 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DOAP06340 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AP000473.2-201ENST00000602659 1537 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DOAP06340 RNU6-707P-201ENST00000364647 95 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 EI24P3-201ENST00000399046 1062 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 RPL21P108-201ENST00000413857 481 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 PAICSP7-201ENST00000419829 962 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AL139421.1-201ENST00000423010 169 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 OR5AW1P-201ENST00000426334 1006 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 RPS3AP54-201ENST00000435535 734 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 DHFRP3-201ENST00000455595 559 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DOAP06340 RPL7P48-201ENST00000461513 746 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 RPS27AP17-201ENST00000463344 455 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 SETP11-201ENST00000473027 690 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 RPL30P6-201ENST00000475925 342 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC023424.1-201ENST00000496058 459 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DOAP06340 HIGD1AP10-201ENST00000527837 282 ntBASIC5.3□□□□□ -1.56
HLA-DOAP06340 OR8A2P-201ENST00000528631 952 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms