Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 C2orf27A-204ENST00000623058 969 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AC004943.3-201ENST00000624116 600 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AC010928.1-201ENST00000592477 1447 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CLPTM1O96005 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.09□□□□□ -1.75
CLPTM1O96005 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLPTM1O96005 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLPTM1O96005 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
CLPTM1O96005 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLPTM1O96005 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLPTM1O96005 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CLPTM1O96005 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLPTM1O96005 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLPTM1O96005 AL590240.1-201ENST00000334118 313 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 RNU4-51P-201ENST00000364206 140 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CLPTM1O96005 RNU6-636P-201ENST00000384598 107 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLPTM1O96005 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AC009965.2-201ENST00000425328 970 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 MOB1AP1-201ENST00000430903 535 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.08□□□□□ -1.76
CLPTM1O96005 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.08□□□□□ -1.76
CLPTM1O96005 NANOGP2-201ENST00000435391 727 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AL592437.1-201ENST00000443781 492 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 Z77249.1-201ENST00000444622 1175 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 MTND4P10-201ENST00000446199 1363 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AC106872.2-201ENST00000494303 480 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.08□□□□□ -1.76
CLPTM1O96005 SCARNA22-201ENST00000503991 125 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.08□□□□□ -1.76
CLPTM1O96005 RNA5SP143-201ENST00000516936 115 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.08□□□□□ -1.76
CLPTM1O96005 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 IGKV2D-10-201ENST00000520194 281 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.08□□□□□ -1.76
CLPTM1O96005 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLPTM1O96005 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.08□□□□□ -1.76
CLPTM1O96005 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.08□□□□□ -1.76
CLPTM1O96005 BPIFA4P-203ENST00000603168 689 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 AL035411.2-201ENST00000604022 421 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 AC025811.1-201ENST00000604312 472 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 AL392112.1-201ENST00000605115 829 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AC009237.15-201ENST00000610252 501 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 AL161616.1-201ENST00000611867 286 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 AC068057.2-201ENST00000624047 895 ntBASIC4.08□□□□□ -1.76
CLPTM1O96005 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.08□□□□□ -1.76
CLPTM1O96005 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.08□□□□□ -1.76
CLPTM1O96005 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.08□□□□□ -1.76
CLPTM1O96005 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.08□□□□□ -1.76
CLPTM1O96005 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CLPTM1O96005 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CLPTM1O96005 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.07□□□□□ -1.76
CLPTM1O96005 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLPTM1O96005 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
CLPTM1O96005 IGKV7-3-201ENST00000357453 298 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 MTCO1P56-201ENST00000401674 224 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 MIR1911-201ENST00000410783 80 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.07□□□□□ -1.76
CLPTM1O96005 RPL22P18-201ENST00000417197 377 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 BX510359.2-201ENST00000417920 305 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.07□□□□□ -1.76
CLPTM1O96005 RAC1P8-201ENST00000427086 527 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 NPM1P24-201ENST00000428039 894 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 RPL23AP89-201ENST00000439324 255 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 EEF1A1P39-201ENST00000440791 250 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.07□□□□□ -1.76
CLPTM1O96005 YWHAQP9-201ENST00000445891 512 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 AL589880.1-201ENST00000448271 287 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 FABP3P2-201ENST00000453169 399 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.07□□□□□ -1.76
CLPTM1O96005 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.07□□□□□ -1.76
CLPTM1O96005 OR52A4P-201ENST00000472867 958 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 AC087385.1-201ENST00000475062 312 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.07□□□□□ -1.76
CLPTM1O96005 RPS23P1-201ENST00000491662 432 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 AC104108.1-201ENST00000509930 412 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.07□□□□□ -1.76
CLPTM1O96005 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.07□□□□□ -1.76
CLPTM1O96005 AC022790.1-201ENST00000522872 204 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.07□□□□□ -1.76
CLPTM1O96005 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.07□□□□□ -1.76
CLPTM1O96005 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.07□□□□□ -1.76
CLPTM1O96005 AC009097.3-201ENST00000563557 1018 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.07□□□□□ -1.76
CLPTM1O96005 AC008751.2-201ENST00000597885 980 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms