Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-2O95096 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-2O95096 OR4A12P-201ENST00000530847 918 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-2O95096 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NKX2-2O95096 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-2O95096 AC125611.1-201ENST00000549563 229 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 DUXAP6-201ENST00000553858 601 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.22□□□□□ -1.73
NKX2-2O95096 DUXAP1-201ENST00000556632 463 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 RPL21P7-201ENST00000557463 483 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AP005262.1-201ENST00000582646 997 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-2O95096 AC131235.4-201ENST00000609288 620 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AL450489.1-201ENST00000612071 468 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 AC069209.1-201ENST00000619282 651 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.22□□□□□ -1.73
NKX2-2O95096 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NKX2-2O95096 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-2O95096 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 CPHL1P-201ENST00000461341 3407 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 LINC00622-201ENST00000562811 1570 ntBASIC4.22□□□□□ -1.73
NKX2-2O95096 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-2O95096 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-2O95096 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-2O95096 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 RNU4-44P-201ENST00000363050 141 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 RNU6-984P-201ENST00000363236 109 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 Y_RNA.311-201ENST00000365068 96 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-2O95096 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NKX2-2O95096 RNU6-1226P-201ENST00000384317 107 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 MIR195-201ENST00000385194 87 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NKX2-2O95096 BTBD10P2-201ENST00000404779 676 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AC069218.2-201ENST00000411665 344 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AL133384.1-201ENST00000412744 351 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 RPL31P2-201ENST00000413849 377 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AC004987.3-201ENST00000413879 771 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AC006960.1-201ENST00000419980 153 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-2O95096 TMX2P1-201ENST00000436507 708 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-2O95096 RPL23AP16-201ENST00000441715 421 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 Z77249.1-201ENST00000444622 1175 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.21□□□□□ -1.74
NKX2-2O95096 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 AL513533.1-201ENST00000453728 415 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 RPL37P6-202ENST00000464216 403 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AC010587.2-201ENST00000511727 448 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 SNORA3.4-201ENST00000515969 96 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 UBTFL10-201ENST00000528532 562 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-2O95096 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-2O95096 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-2O95096 AC079171.1-201ENST00000568788 914 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.21□□□□□ -1.74
NKX2-2O95096 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-2O95096 AC090181.2-201ENST00000602975 672 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 BPIFA4P-203ENST00000603168 689 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 DPRXP5-201ENST00000604662 539 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-2O95096 AP001521.1-201ENST00000609150 300 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 MIR6780A-201ENST00000615089 68 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 Z99129.2-201ENST00000619967 314 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-2O95096 AC116618.1-201ENST00000634617 774 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.21□□□□□ -1.74
NKX2-2O95096 AC097655.1-201ENST00000635075 318 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-2O95096 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-2O95096 EIF2AP4-201ENST00000424793 1781 ntBASIC4.21□□□□□ -1.74
NKX2-2O95096 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-2O95096 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-2O95096 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NKX2-2O95096 AC104260.2-201ENST00000623551 3497 ntBASIC4.2□□□□□ -1.74
NKX2-2O95096 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-2O95096 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-2O95096 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
NKX2-2O95096 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-2O95096 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NKX2-2O95096 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-2O95096 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-2O95096 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-2O95096 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-2O95096 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-2O95096 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-2O95096 RN7SKP103-201ENST00000363848 320 ntBASIC4.2□□□□□ -1.74
NKX2-2O95096 SNORD113.2-201ENST00000364166 89 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms