Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC009965.2-201ENST00000425328 970 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.87□□□□□ -1.63
PROM1O43490 NPM1P24-201ENST00000428039 894 ntBASIC4.87□□□□□ -1.63
PROM1O43490 SKP1P3-201ENST00000429280 487 ntBASIC4.87□□□□□ -1.63
PROM1O43490 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.87□□□□□ -1.63
PROM1O43490 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.87□□□□□ -1.63
PROM1O43490 CYCSP24-201ENST00000445119 316 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.87□□□□□ -1.63
PROM1O43490 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.87□□□□□ -1.63
PROM1O43490 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.87□□□□□ -1.63
PROM1O43490 APOOP2-201ENST00000461561 539 ntBASIC4.87□□□□□ -1.63
PROM1O43490 RPS7P7-201ENST00000463499 571 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AC104763.1-201ENST00000475274 360 ntBASIC4.87□□□□□ -1.63
PROM1O43490 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
PROM1O43490 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.87□□□□□ -1.63
PROM1O43490 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.87□□□□□ -1.63
PROM1O43490 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.87□□□□□ -1.63
PROM1O43490 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.87□□□□□ -1.63
PROM1O43490 OR7K1P-201ENST00000546439 926 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.87□□□□□ -1.63
PROM1O43490 AC068446.3-201ENST00000555285 382 ntBASIC4.87□□□□□ -1.63
PROM1O43490 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.87□□□□□ -1.63
PROM1O43490 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.87□□□□□ -1.63
PROM1O43490 AC234778.2-201ENST00000566241 354 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.87□□□□□ -1.63
PROM1O43490 MIR4646-201ENST00000580775 63 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.87□□□□□ -1.63
PROM1O43490 AC091805.2-201ENST00000603848 235 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.87□□□□□ -1.63
PROM1O43490 AC133644.2-201ENST00000608142 540 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AC055764.2-201ENST00000610089 670 ntBASIC4.87□□□□□ -1.63
PROM1O43490 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PROM1O43490 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.87□□□□□ -1.63
PROM1O43490 AC009704.2-201ENST00000618739 483 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AP001784.1-201ENST00000624107 428 ntBASIC4.87□□□□□ -1.63
PROM1O43490 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.87□□□□□ -1.63
PROM1O43490 AC025048.6-202ENST00000627667 438 ntBASIC4.87□□□□□ -1.63
PROM1O43490 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PROM1O43490 AC046144.1-201ENST00000478559 1853 ntBASIC4.87□□□□□ -1.63
PROM1O43490 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PROM1O43490 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PROM1O43490 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PROM1O43490 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PROM1O43490 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
PROM1O43490 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PROM1O43490 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PROM1O43490 AL450345.1-202ENST00000605741 3881 ntBASIC4.87□□□□□ -1.63
PROM1O43490 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.87□□□□□ -1.63
PROM1O43490 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PROM1O43490 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PROM1O43490 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.86□□□□□ -1.63
PROM1O43490 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.86□□□□□ -1.63
PROM1O43490 AC100778.3-201ENST00000580060 1750 ntBASIC4.86□□□□□ -1.63
PROM1O43490 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PROM1O43490 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PROM1O43490 Y_RNA.41-201ENST00000362646 102 ntBASIC4.86□□□□□ -1.63
PROM1O43490 RNU6-1066P-201ENST00000363573 105 ntBASIC4.86□□□□□ -1.63
PROM1O43490 UBBP2-201ENST00000376781 231 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC019155.1-201ENST00000382242 574 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AL133264.1-201ENST00000407157 562 ntBASIC4.86□□□□□ -1.63
PROM1O43490 MIR1271-201ENST00000408537 86 ntBASIC4.86□□□□□ -1.63
PROM1O43490 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PROM1O43490 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.86□□□□□ -1.63
PROM1O43490 RPL23AP39-201ENST00000415533 405 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.86□□□□□ -1.63
PROM1O43490 MTCYBP38-201ENST00000417160 1123 ntBASIC4.86□□□□□ -1.63
PROM1O43490 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PROM1O43490 AC104333.2-201ENST00000422630 192 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.86□□□□□ -1.63
PROM1O43490 AC092017.2-201ENST00000427600 362 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.86□□□□□ -1.63
PROM1O43490 RPL7P4-203ENST00000430239 730 ntBASIC4.86□□□□□ -1.63
PROM1O43490 TXNP5-201ENST00000441043 315 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.86□□□□□ -1.63
PROM1O43490 RPS7P5-201ENST00000441482 581 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AL353572.1-201ENST00000442490 417 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.86□□□□□ -1.63
PROM1O43490 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.86□□□□□ -1.63
PROM1O43490 AL389915.2-201ENST00000454576 441 ntBASIC4.86□□□□□ -1.63
PROM1O43490 DNAJC19P1-201ENST00000455312 319 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC010307.1-201ENST00000467206 836 ntBASIC4.86□□□□□ -1.63
PROM1O43490 RPS4XP15-201ENST00000489210 795 ntBASIC4.86□□□□□ -1.63
PROM1O43490 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.86□□□□□ -1.63
PROM1O43490 SNRPCP2-201ENST00000504370 475 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.86□□□□□ -1.63
PROM1O43490 AC022832.1-201ENST00000530718 645 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC016957.1-201ENST00000534895 309 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.86□□□□□ -1.63
PROM1O43490 MIR3691-201ENST00000578066 90 ntBASIC4.86□□□□□ -1.63
PROM1O43490 MIR4436B2-201ENST00000581415 91 ntBASIC4.86□□□□□ -1.63
PROM1O43490 MIR4436B1-201ENST00000583272 91 ntBASIC4.86□□□□□ -1.63
PROM1O43490 VN1R84P-201ENST00000593697 235 ntBASIC4.86□□□□□ -1.63
PROM1O43490 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
PROM1O43490 AC090186.1-201ENST00000605991 572 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AP005432.2-201ENST00000608162 586 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC243654.2-201ENST00000612843 443 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC099494.2-201ENST00000623371 978 ntBASIC4.86□□□□□ -1.63
PROM1O43490 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.86□□□□□ -1.63
PROM1O43490 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.86□□□□□ -1.63
PROM1O43490 CASC19-221ENST00000641309 1382 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms