Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
CAPN6Q9Y6Q1 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CAPN6Q9Y6Q1 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 OR11H4-201ENST00000315409 1082 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 RNU6-115P-201ENST00000364310 107 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 MIR1275-201ENST00000408770 80 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 RNU6-908P-201ENST00000410160 94 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC017078.1-201ENST00000416146 368 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 TAAR7P-201ENST00000436141 242 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 LSM1P1-201ENST00000438629 273 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 RPL23AP16-201ENST00000441715 421 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC073476.1-201ENST00000452854 407 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 TRGVB-201ENST00000453257 471 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC019084.1-201ENST00000457337 432 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 RPS20P20-201ENST00000460498 340 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC104339.1-201ENST00000465478 348 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC044810.1-201ENST00000480271 711 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 RPS26P24-201ENST00000497656 331 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 LSM3P4-201ENST00000502948 309 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 NIFKP7-201ENST00000503365 834 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 EIF3KP3-201ENST00000514461 639 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 HIGD1AP6-201ENST00000521833 279 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AP000790.1-201ENST00000528891 737 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AP000648.1-201ENST00000529682 397 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 LSM3P2-201ENST00000551246 273 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC007424.1-203ENST00000554613 687 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 ARGFXP2-201ENST00000579304 949 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 MIR3671-201ENST00000580455 88 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC104785.1-201ENST00000603220 588 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC093788.1-201ENST00000609356 927 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AL132765.2-201ENST00000610812 351 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC243773.3-201ENST00000613270 256 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 AC125336.1-201ENST00000508893 2827 ntBASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CAPN6Q9Y6Q1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 SRRM1P3-201ENST00000426911 2678 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AC010928.1-201ENST00000592477 1447 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 GNG5P1-201ENST00000255500 204 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 SNRPEP3-201ENST00000338402 276 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 RNA5SP131-201ENST00000365452 119 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 MIR320C1-201ENST00000408566 88 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AL359704.1-201ENST00000411586 781 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 COX5BP7-201ENST00000414780 274 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 RAD23BP1-201ENST00000421404 1227 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 MTND2P23-201ENST00000422990 651 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 RPL23AP19-201ENST00000436229 369 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 HMGB3P12-201ENST00000438745 556 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 ENPP7P11-201ENST00000505915 627 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AC006499.2-201ENST00000513470 337 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 HMGB1P42-201ENST00000532126 553 ntBASIC5.77□□□□□ -1.49
CAPN6Q9Y6Q1 HPRT1P3-201ENST00000539521 576 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms