Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC008837.1-201ENST00000511513 412 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 SNORA31.9-201ENST00000516429 84 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 MIR6798-201ENST00000612887 67 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AC021755.4-201ENST00000616620 456 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AL138721.1-201ENST00000616756 179 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 RMST_9.1-201ENST00000619945 193 ntBASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNX9Q9Y5X1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 MIR448-201ENST00000362131 111 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 RNU4-51P-201ENST00000364206 140 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 Y_RNA.472-201ENST00000384322 102 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 RNA5SP372-201ENST00000390836 115 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 SNORD66.1-201ENST00000391230 76 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC136624.1-201ENST00000400791 413 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 HSPD1P16-201ENST00000402302 394 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC107081.1-201ENST00000414975 361 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AL513175.2-201ENST00000422071 443 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC246680.2-201ENST00000422106 389 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 RPL23AP38-201ENST00000423801 469 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 RSL24D1P6-201ENST00000426934 401 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 RPL7P34-201ENST00000433316 712 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC092685.1-201ENST00000447960 1243 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AL589880.1-201ENST00000448271 287 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC093311.1-201ENST00000506586 2021 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 MIR4512-201ENST00000583257 77 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC005261.4-201ENST00000600047 1385 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC010975.3-201ENST00000618727 978 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AC009039.2-201ENST00000624524 529 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AL121594.5-201ENST00000631724 573 ntBASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX9Q9Y5X1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
SNX9Q9Y5X1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.59□□□□□ -1.68
SNX9Q9Y5X1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 RNU6-984P-201ENST00000363236 109 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 RNA5SP513-201ENST00000364648 118 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL161909.1-201ENST00000397390 712 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 VTA1P1-201ENST00000414044 866 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 RPS24P7-201ENST00000416921 246 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC004448.2-201ENST00000422360 586 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL138785.1-201ENST00000425821 331 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL035407.2-201ENST00000454090 378 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 RPL23AP81-201ENST00000455252 467 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 RNU7-140P-201ENST00000459546 60 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms