Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA6Q9Y5G7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA6Q9Y5G7 ASNSP1-201ENST00000518311 1939 ntBASIC5.09□□□□□ -1.6
PCDHGA6Q9Y5G7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
PCDHGA6Q9Y5G7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA6Q9Y5G7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA6Q9Y5G7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 SNORA16A-201ENST00000384342 137 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MIR585-201ENST00000384887 94 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 ARF4P3-201ENST00000397387 509 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL109941.1-201ENST00000401925 229 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL390316.1-201ENST00000406279 553 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 RN7SKP266-201ENST00000410232 287 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 RPS15AP40-201ENST00000419621 391 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC006366.1-201ENST00000422002 759 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MTCO2P5-201ENST00000422621 426 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 PSMD10P3-201ENST00000437000 448 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL772161.1-201ENST00000439130 476 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL138878.2-201ENST00000440581 1241 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MTCO1P19-201ENST00000443487 500 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 GEMIN8P3-201ENST00000445417 720 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL589765.3-201ENST00000446084 462 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 VN1R32P-201ENST00000452234 905 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 SSXP1-201ENST00000453640 473 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 USP9YP34-201ENST00000453983 808 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 DNAJC19P1-201ENST00000455312 319 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 CFTRP1-201ENST00000456646 183 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC091564.1-201ENST00000464563 479 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 BX284632.1-201ENST00000478218 541 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 TMEM251P1-201ENST00000503717 318 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC004069.2-201ENST00000505438 1114 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 CBX3P3-201ENST00000508108 532 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 NDUFB5P1-201ENST00000508134 564 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC024589.1-201ENST00000512207 263 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 RN7SKP66-201ENST00000516681 231 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AP002963.1-201ENST00000530590 184 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 LSM3P2-201ENST00000551246 273 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC040958.1-201ENST00000561102 201 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL133457.1-201ENST00000564251 987 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC141257.3-201ENST00000572906 215 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MAGOH2P-202ENST00000584384 429 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MIR3611-201ENST00000584484 83 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC022146.1-201ENST00000595307 847 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL513477.2-201ENST00000607858 568 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AL353600.1-201ENST00000608148 251 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC013562.2-201ENST00000611632 603 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC025588.4-201ENST00000615802 908 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC012414.7-202ENST00000622705 1090 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 AC091932.2-201ENST00000623014 291 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 Z95327.2-201ENST00000414579 1873 ntBASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA6Q9Y5G7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA6Q9Y5G7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms