Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF6Q9Y252 MFSD13B-201ENST00000420133 1290 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 EIF1P3-201ENST00000423841 334 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 USP12PY-201ENST00000427677 1064 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AL117339.2-201ENST00000430475 180 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 MTCO1P43-201ENST00000431831 488 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 BTF3P10-201ENST00000433415 495 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 RPL7P28-201ENST00000437739 740 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 UBE2V1P5-201ENST00000440070 405 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 Z95327.1-201ENST00000446082 482 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 RPL31P61-201ENST00000496160 376 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 RPS27AP13-201ENST00000498403 237 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC112518.2-201ENST00000508565 425 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC104108.1-201ENST00000509930 412 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 MTND4LP31-201ENST00000514859 294 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 RNA5SP143-201ENST00000516936 115 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF6Q9Y252 DEFB109D-201ENST00000529497 240 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC063950.1-201ENST00000552036 308 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AL442163.2-201ENST00000553912 710 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 ATP5F1P7-201ENST00000567330 760 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC141257.3-201ENST00000572906 215 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AL354984.3-201ENST00000604803 325 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 OR2BH1P-201ENST00000608850 864 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC128687.2-201ENST00000609657 566 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC009452.1-201ENST00000640823 606 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF6Q9Y252 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AL512283.1-201ENST00000606756 1384 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 BDP1P-201ENST00000582658 1990 ntBASIC3.85□□□□□ -1.79
RNF6Q9Y252 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RNF6Q9Y252 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF6Q9Y252 AC090229.1-201ENST00000590983 1609 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF6Q9Y252 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF6Q9Y252 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF6Q9Y252 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF6Q9Y252 RNA5SP175-201ENST00000364275 119 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL583835.1-201ENST00000399570 407 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL356095.1-201ENST00000417217 199 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC114814.2-201ENST00000419195 485 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF6Q9Y252 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 MTCO1P54-201ENST00000430139 712 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC023347.2-201ENST00000433994 462 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC092809.1-201ENST00000441469 474 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL512326.1-201ENST00000443050 721 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC078857.1-201ENST00000469870 667 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC073522.1-201ENST00000483312 377 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC010374.1-201ENST00000503762 1237 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC008628.1-201ENST00000508663 265 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF6Q9Y252 KCTD9P2-201ENST00000512203 1013 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC018797.3-201ENST00000513388 1241 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC008494.2-201ENST00000514544 370 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AP003049.1-201ENST00000529418 457 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 PTP4A1P6-201ENST00000531034 478 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC106734.1-201ENST00000568646 663 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 RN7SL600P-201ENST00000581811 299 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC090312.2-201ENST00000582687 378 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC006130.2-201ENST00000586202 326 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF6Q9Y252 AP003392.5-201ENST00000607857 415 ntBASIC3.84□□□□□ -1.79
RNF6Q9Y252 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms