Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC015524.1-201ENST00000491585 472 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 IGKV3D-34-201ENST00000522638 302 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 MT1CP-201ENST00000567054 174 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL158827.2-201ENST00000602494 330 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL670379.6-201ENST00000603753 252 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL670379.1-201ENST00000604752 252 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL670379.5-201ENST00000605253 252 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL670379.8-201ENST00000605353 252 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL670379.7-201ENST00000605823 252 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AL691447.3-201ENST00000635020 330 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AC108099.1-201ENST00000564402 3258 ntBASIC6.97□□□□□ -1.29
LHX6Q9UPM6 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
LHX6Q9UPM6 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 AP003486.1-201ENST00000525716 3994 ntBASIC6.96□□□□□ -1.29
LHX6Q9UPM6 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 AC092111.1-201ENST00000618256 3358 ntBASIC6.96□□□□□ -1.29
LHX6Q9UPM6 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
LHX6Q9UPM6 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 SNORD113-8-201ENST00000363497 74 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 RNU6-1130P-201ENST00000365434 107 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 Y_RNA.533-201ENST00000384596 114 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 PRELID1P2-201ENST00000407805 396 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 AC096921.1-201ENST00000411661 375 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 RPL31P60-201ENST00000478450 367 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 UBA52P7-201ENST00000486088 380 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 RNU6-1219P-201ENST00000516143 112 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 RNU6-496P-201ENST00000516145 99 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 RNU2-31P-201ENST00000516954 155 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 AC112693.2-201ENST00000556538 232 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 AC011487.3-201ENST00000593607 453 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 FP236240.3-201ENST00000623061 327 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 AC129908.1-201ENST00000624553 648 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 MIR4302-201ENST00000638058 60 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 SHQ1P1-201ENST00000437111 1544 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 PRO1804-201ENST00000623780 2050 ntBASIC6.96□□□□□ -1.3
LHX6Q9UPM6 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
LHX6Q9UPM6 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC6.95□□□□□ -1.3
LHX6Q9UPM6 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX6Q9UPM6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX6Q9UPM6 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX6Q9UPM6 AC145138.1-201ENST00000512908 2851 ntBASIC6.95□□□□□ -1.3
LHX6Q9UPM6 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX6Q9UPM6 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX6Q9UPM6 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
LHX6Q9UPM6 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX6Q9UPM6 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms