Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 TRAPPC2P10-201ENST00000415662 323 ntBASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 RPL7P4-203ENST00000430239 730 ntBASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AL353597.2-202ENST00000434901 373 ntBASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 RPL23AP65-201ENST00000475608 468 ntBASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 MTND6P6-201ENST00000478031 263 ntBASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AC087369.1-201ENST00000520775 996 ntBASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 MARK2P15-201ENST00000432204 2186 ntBASIC7.51□□□□□ -1.21
SHROOM4Q9ULL8 SNORD56.4-201ENST00000363883 71 ntBASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 VDAC2P1-201ENST00000399358 958 ntBASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 ATP5A1P2-201ENST00000412323 255 ntBASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 RPL6P9-201ENST00000466502 859 ntBASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 MIR5187-201ENST00000583479 76 ntBASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 AC116563.2-201ENST00000624751 535 ntBASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 ZNF833P-201ENST00000424938 1494 ntBASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 AC010266.2-201ENST00000564741 3255 ntBASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC7.5□□□□□ -1.21
SHROOM4Q9ULL8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC234772.1-201ENST00000377927 937 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AP002784.2-201ENST00000397300 549 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 BX664727.1-201ENST00000416024 466 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC012497.1-201ENST00000429392 575 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 ARL5AP2-201ENST00000444698 533 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 MTND2P8-201ENST00000450555 1025 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 EIF4A1P11-201ENST00000451239 222 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 RPS4XP12-201ENST00000461747 709 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC107918.3-201ENST00000533272 382 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AL121594.4-201ENST00000556211 1196 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC125494.3-201ENST00000602759 455 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC073569.3-201ENST00000619055 682 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC024595.1-201ENST00000623088 387 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AL031595.2-201ENST00000624215 19071 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AP001642.1-201ENST00000624727 2117 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 RNU6-98P-201ENST00000384173 107 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 CYCSP4-201ENST00000429682 331 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AP003717.3-201ENST00000544832 1180 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC012417.1-201ENST00000582307 1039 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 DNAJC19P3-201ENST00000594491 331 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 AC115621.1-201ENST00000604653 858 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 5S_rRNA.16-201ENST00000612928 119 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 VN1R9P-201ENST00000614184 867 ntBASIC7.49□□□□□ -1.21
SHROOM4Q9ULL8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 OR52E6-202ENST00000379946 954 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 RNU6-146P-201ENST00000384602 108 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 HMGB3P19-201ENST00000403971 560 ntBASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.48□□□□□ -1.21
SHROOM4Q9ULL8 AC236972.1-201ENST00000433225 199 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms