Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNA5SP235-201ENST00000365411 114 ntBASIC4.34□□□□□ -1.71
SCN11AQ9UI33 RNA5SP296-201ENST00000410523 111 ntBASIC4.34□□□□□ -1.71
SCN11AQ9UI33 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 MTND6P32-201ENST00000457611 483 ntBASIC4.34□□□□□ -1.71
SCN11AQ9UI33 TMED11P-201ENST00000479478 690 ntBASIC4.34□□□□□ -1.71
SCN11AQ9UI33 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 RNVU1-4-201ENST00000612985 164 ntBASIC4.34□□□□□ -1.71
SCN11AQ9UI33 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN11AQ9UI33 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.34□□□□□ -1.72
SCN11AQ9UI33 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SCN11AQ9UI33 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SCN11AQ9UI33 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.34□□□□□ -1.72
SCN11AQ9UI33 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SCN11AQ9UI33 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.34□□□□□ -1.72
SCN11AQ9UI33 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
SCN11AQ9UI33 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 GSTA8P-201ENST00000404253 637 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 UBE2V1P1-201ENST00000430836 445 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 RPL23AP69-201ENST00000431134 458 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 RN7SL863P-201ENST00000462370 296 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 Vault.1-201ENST00000516474 102 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 AC103858.2-201ENST00000621471 543 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 AC099654.11-201ENST00000638857 294 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 AC092435.3-201ENST00000565538 3654 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 AL513302.2-201ENST00000562313 1842 ntBASIC4.33□□□□□ -1.72
SCN11AQ9UI33 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.33□□□□□ -1.72
SCN11AQ9UI33 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 RN7SKP284-201ENST00000411002 343 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AL357552.1-201ENST00000445254 415 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 RNA5SP341-201ENST00000516261 117 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 SCARNA20.6-201ENST00000517251 106 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 OR10D4P-201ENST00000525892 951 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AL121576.1-201ENST00000556055 276 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AF117829.1-206ENST00000621883 3802 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 CR381670.1-201ENST00000624291 1693 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 MIR448-201ENST00000362131 111 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 SNORA38.1-201ENST00000364172 131 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 SNORA54-201ENST00000384281 123 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AL121594.4-201ENST00000556211 1196 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 OR1AB1P-201ENST00000585564 761 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 BNIP3P38-201ENST00000601117 544 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 AL713922.2-201ENST00000619384 716 ntBASIC4.32□□□□□ -1.72
SCN11AQ9UI33 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCN11AQ9UI33 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 NCAPGP1-201ENST00000505112 1814 ntBASIC4.31□□□□□ -1.72
SCN11AQ9UI33 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 MRPL35P4-201ENST00000453682 566 ntBASIC4.31□□□□□ -1.72
SCN11AQ9UI33 AC080014.1-201ENST00000496877 1201 ntBASIC4.31□□□□□ -1.72
SCN11AQ9UI33 AC021678.1-201ENST00000505195 936 ntBASIC4.31□□□□□ -1.72
SCN11AQ9UI33 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 OR4R3P-201ENST00000525084 838 ntBASIC4.31□□□□□ -1.72
SCN11AQ9UI33 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SCN11AQ9UI33 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms