Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC023161.2-201ENST00000551218 780 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 MIR3160-1-201ENST00000577972 85 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AC015911.5-201ENST00000587076 451 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AC022916.3-201ENST00000592961 742 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AC103710.3-201ENST00000608157 948 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AC092653.1-201ENST00000608509 531 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AC006946.3-201ENST00000609791 756 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AL732618.1-201ENST00000623251 301 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 RPL23AP61-201ENST00000623642 466 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AC068724.3-201ENST00000625906 87 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AL732372.2-225ENST00000642124 456 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AC073073.2-201ENST00000609827 2578 ntBASIC3.67□□□□□ -1.82
TREX1Q9NSU2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TREX1Q9NSU2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TREX1Q9NSU2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.67□□□□□ -1.82
TREX1Q9NSU2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.67□□□□□ -1.82
TREX1Q9NSU2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.67□□□□□ -1.82
TREX1Q9NSU2 CEP170P1-201ENST00000502249 4587 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 RNU1-87P-201ENST00000363727 170 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 RN7SKP156-201ENST00000410308 342 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 MTND2P15-201ENST00000418575 892 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 SDCBPP2-201ENST00000424643 885 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC017083.1-201ENST00000428093 483 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 RPS29P7-201ENST00000439662 171 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 RAD1P2-201ENST00000446414 663 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AP001086.1-201ENST00000494882 321 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC091917.2-201ENST00000505002 744 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 OR5H4P-201ENST00000510851 923 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC034244.2-201ENST00000514668 858 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 OR5AP1P-201ENST00000529730 940 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 TRAV15-201ENST00000556680 249 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC009268.1-201ENST00000561352 1203 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 HSPE1P5-201ENST00000561489 272 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AL109741.3-201ENST00000561748 592 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 SS18L2P2-201ENST00000583960 235 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC068831.8-201ENST00000620171 435 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 AC138649.5-201ENST00000637456 137 ntBASIC3.66□□□□□ -1.82
TREX1Q9NSU2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TREX1Q9NSU2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.65□□□□□ -1.82
TREX1Q9NSU2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TREX1Q9NSU2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TREX1Q9NSU2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TREX1Q9NSU2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
TREX1Q9NSU2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 OR4A15-201ENST00000314706 1035 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 RNU6-244P-201ENST00000391028 104 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 RPL32P23-201ENST00000397237 405 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 RNA5SP498-201ENST00000411342 120 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 RNF19BPX-201ENST00000426224 625 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC006989.1-201ENST00000427212 131 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC007563.3-201ENST00000433233 371 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC091390.1-201ENST00000433904 331 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 PPIAP17-201ENST00000438507 471 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC074367.1-201ENST00000438685 1125 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 RPS29P31-201ENST00000446147 164 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 GAPDHP36-201ENST00000480688 918 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC021087.2-201ENST00000504656 1203 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 PCNAP1-201ENST00000505363 709 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 RNU6-579P-201ENST00000516879 102 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 MIR5685-201ENST00000579080 79 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 MIR4738-201ENST00000579134 87 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC244505.7-201ENST00000599675 272 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AC090912.3-201ENST00000609775 533 ntBASIC3.65□□□□□ -1.83
TREX1Q9NSU2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.65□□□□□ -1.83
TREX1Q9NSU2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms