Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC012065.2-201ENST00000421295 375 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 OR8F1P-201ENST00000425243 930 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 BRWD1P3-201ENST00000428816 390 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AL356276.2-201ENST00000435919 558 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AL445466.1-201ENST00000448432 357 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 OR7E116P-201ENST00000448529 957 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 HMGB3P21-201ENST00000452483 547 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC092865.4-201ENST00000477936 615 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 RNA5SP362-201ENST00000516048 118 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC022790.1-201ENST00000522872 204 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC136619.2-201ENST00000563361 631 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 MIR4776-2-201ENST00000580204 80 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 MIR4801-201ENST00000582704 82 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AL353997.4-201ENST00000586196 166 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 COX6CP7-201ENST00000597056 208 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 AC099654.13-201ENST00000639774 207 ntBASIC5.65□□□□□ -1.5
TRIM55Q9BYV6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.65□□□□□ -1.51
TRIM55Q9BYV6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM55Q9BYV6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TRIM55Q9BYV6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM55Q9BYV6 AC083899.1-201ENST00000454465 3819 ntBASIC5.65□□□□□ -1.51
TRIM55Q9BYV6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.65□□□□□ -1.51
TRIM55Q9BYV6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AL049780.3-201ENST00000624612 1583 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 RNU6-28P-201ENST00000362378 107 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 RNU6-878P-201ENST00000384578 110 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC096921.1-201ENST00000411661 375 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AL358176.3-201ENST00000420757 454 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AL121776.1-201ENST00000429337 372 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AL590233.1-201ENST00000430017 456 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 TMEM183AP1-205ENST00000432739 290 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 MTND1P1-201ENST00000445453 368 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 NOP56P2-201ENST00000447491 769 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC093392.2-201ENST00000450682 337 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 BX276092.4-201ENST00000452056 248 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 EIF3LP3-201ENST00000495197 822 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AL136038.1-201ENST00000497246 351 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 HMGB1P21-201ENST00000502313 581 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC105252.1-201ENST00000503089 286 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 SNORA18.6-201ENST00000516792 115 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 RN7SKP277-201ENST00000516895 283 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 RNU6-1003P-201ENST00000517099 105 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AP000648.1-201ENST00000529682 397 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC087481.2-201ENST00000565492 330 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 MIR3176-201ENST00000582210 90 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 YWHAQP7-201ENST00000603536 658 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC007566.2-201ENST00000603642 413 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 AC013244.1-201ENST00000604279 193 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 RBM11P1-201ENST00000604951 799 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 OR5AK4P-201ENST00000635912 903 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms