Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
CCM2Q9BSQ5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
CCM2Q9BSQ5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCM2Q9BSQ5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.07□□□□□ -1.76
CCM2Q9BSQ5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCM2Q9BSQ5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCM2Q9BSQ5 ERCC6-202ENST00000374127 1782 ntBASIC4.07□□□□□ -1.76
CCM2Q9BSQ5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 MTCO1P14-201ENST00000441695 1559 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 SNORA60-201ENST00000362396 134 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 RNU6-1339P-201ENST00000363574 91 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 DNAJC19P6-201ENST00000401853 280 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AL022722.2-201ENST00000402519 180 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 RPL31P52-201ENST00000407532 367 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 RPL7P53-201ENST00000421245 739 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 DNAJC19P8-201ENST00000452887 259 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 RPL38P1-201ENST00000460914 211 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 HPRT1P2-201ENST00000505250 544 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 IGBP1P5-201ENST00000507524 1000 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC017037.1-201ENST00000508460 471 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 RN7SKP283-201ENST00000517197 270 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC010306.1-201ENST00000523223 1117 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AP003066.2-201ENST00000529375 555 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 MTND5P21-201ENST00000531961 522 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC023825.1-201ENST00000566704 1030 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC090246.1-201ENST00000616499 426 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AL049777.1-201ENST00000622740 518 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 ZNF849P-201ENST00000594711 1566 ntBASIC4.06□□□□□ -1.76
CCM2Q9BSQ5 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AL121657.1-201ENST00000327215 531 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 RNA5SP388-201ENST00000362584 119 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 SNORD65C-201ENST00000390962 71 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC114814.2-201ENST00000419195 485 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC093698.1-201ENST00000423843 571 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 ELOCP11-201ENST00000436690 332 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 RPL7P28-201ENST00000437739 740 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 UBE2V1P5-201ENST00000440070 405 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 ELOCP16-201ENST00000444494 332 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC006517.1-201ENST00000480485 328 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 MIR2116-201ENST00000517221 80 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 OR5M7P-201ENST00000526140 972 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC139103.1-201ENST00000534696 1030 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC010735.1-201ENST00000567305 1026 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 RPL23AP87-202ENST00000573039 466 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AP000919.1-202ENST00000581139 1264 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC012417.1-201ENST00000582307 1039 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 NF1P5-201ENST00000588287 448 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC008507.2-201ENST00000588402 1176 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 EIF1P6-201ENST00000600054 334 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 NTAN1P1-201ENST00000603150 646 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC083899.3-201ENST00000603413 594 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms