Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 MIMT1-201ENST00000597105 1050 ntBASIC5.2□□□□□ -1.58
FYCO1Q9BQS8 BNIP3P38-201ENST00000601117 544 ntBASIC5.2□□□□□ -1.58
FYCO1Q9BQS8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.2□□□□□ -1.58
FYCO1Q9BQS8 RNVU1-4-201ENST00000612985 164 ntBASIC5.2□□□□□ -1.58
FYCO1Q9BQS8 AL359715.5-201ENST00000623431 443 ntBASIC5.2□□□□□ -1.58
FYCO1Q9BQS8 SCARNA15.3-201ENST00000626315 122 ntBASIC5.2□□□□□ -1.58
FYCO1Q9BQS8 SCARNA4.1-201ENST00000628597 123 ntBASIC5.2□□□□□ -1.58
FYCO1Q9BQS8 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 SNORA54-201ENST00000384281 123 ntBASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 AL136131.1-201ENST00000406079 803 ntBASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 HMGB3P9-201ENST00000441799 583 ntBASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 IGHV3-32-201ENST00000519182 355 ntBASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 HIGD1AP1-201ENST00000550979 275 ntBASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 MTND4P26-201ENST00000415971 1359 ntBASIC5.19□□□□□ -1.58
FYCO1Q9BQS8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 MTCO1P46-201ENST00000451639 1491 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 RPL23AP57-201ENST00000332361 466 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AC012065.2-201ENST00000421295 375 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 RN7SL863P-201ENST00000462370 296 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AC021205.2-201ENST00000480069 347 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AC004024.1-201ENST00000549244 247 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AL157817.1-201ENST00000614264 790 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AC105227.2-201ENST00000615075 605 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AC024023.1-201ENST00000624530 922 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 AC244205.2-202ENST00000635781 342 ntBASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
FYCO1Q9BQS8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 SNORA48.2-201ENST00000390926 124 ntBASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 RNU4-47P-201ENST00000410876 114 ntBASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 AC008264.1-201ENST00000447612 367 ntBASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 AP001992.1-205ENST00000462248 379 ntBASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 AC027807.1-201ENST00000559921 996 ntBASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 MIR2682-201ENST00000580305 110 ntBASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 AC017071.1-201ENST00000564407 2204 ntBASIC5.17□□□□□ -1.58
FYCO1Q9BQS8 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 AL136116.1-201ENST00000403591 381 ntBASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 AL391417.1-201ENST00000404100 426 ntBASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 OR6C71P-201ENST00000432580 913 ntBASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 RPL27AP5-201ENST00000469428 449 ntBASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 AC090136.1-201ENST00000520009 240 ntBASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 CYP2C60P-201ENST00000566088 139 ntBASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.16□□□□□ -1.58
FYCO1Q9BQS8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 AL122016.1-201ENST00000403365 367 ntBASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 ZNF603P-201ENST00000405613 487 ntBASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 PCBP2P3-201ENST00000509726 843 ntBASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.15□□□□□ -1.58
FYCO1Q9BQS8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FYCO1Q9BQS8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
FYCO1Q9BQS8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
FYCO1Q9BQS8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
FYCO1Q9BQS8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 SNORA7.4-201ENST00000384249 137 ntBASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 RN7SKP289-201ENST00000517244 295 ntBASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 AC107934.2-201ENST00000518653 310 ntBASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 AL513477.2-201ENST00000607858 568 ntBASIC5.14□□□□□ -1.59
FYCO1Q9BQS8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms