Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RAD23BP3-201ENST00000454157 1152 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 MTND1P11-201ENST00000456661 876 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC091965.3-201ENST00000506236 208 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC110768.1-201ENST00000509222 400 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC126615.2-201ENST00000553003 515 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC034268.2-201ENST00000571784 482 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RPL7P50-201ENST00000600588 727 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC004805.2-201ENST00000605382 482 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RNA5SP119-201ENST00000362715 117 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RNU1-149P-201ENST00000390870 161 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC016769.3-201ENST00000396562 315 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RN7SKP151-201ENST00000410230 316 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RNA5SP247-201ENST00000411181 105 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RPL37P1-201ENST00000432310 284 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC022364.2-201ENST00000457963 554 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RNU6-919P-201ENST00000516731 104 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC022616.4-201ENST00000522985 181 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC090115.3-201ENST00000553218 849 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 RN7SL176P-201ENST00000580352 264 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 BRDTP1-201ENST00000605735 677 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC068880.5-201ENST00000624331 290 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 U4.7-201ENST00000638126 106 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 AC010478.1-201ENST00000601500 6762 ntBASIC1.65□□□□□ -2.15
HMCN1Q96RW7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMCN1Q96RW7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms