Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AP006437.1-201ENST00000641440 3685 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 BX842559.1-201ENST00000419615 532 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 HMGB1P16-201ENST00000447155 540 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 DNAJC19P8-201ENST00000452887 259 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 EIF5A2P1-201ENST00000564027 460 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AL137790.1-201ENST00000634283 177 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 MIR423-201ENST00000362201 94 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 RPL12P22-201ENST00000519073 490 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 NRBF2P5-201ENST00000603087 788 ntBASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ALMS1Q8TCU4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 TNPO1P3-201ENST00000436471 2662 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC234772.1-201ENST00000377927 937 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 JKAMPP1-201ENST00000413804 919 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 LIPT1P1-201ENST00000415870 1186 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 KC877373.1-201ENST00000479066 408 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 TRBV12-2-201ENST00000489763 344 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 UBTFL9-201ENST00000534504 1148 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 HMGB3P26-201ENST00000560051 582 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 MIR486-1-201ENST00000612171 68 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC008079.2-201ENST00000623543 20396 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 HSPA8P19-201ENST00000505359 1517 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 TAF9BP1-201ENST00000396646 746 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 RPL7L1P13-201ENST00000511702 739 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC011266.1-201ENST00000624119 3569 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 HDGFP1-201ENST00000405943 252 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 OOSP1P1-201ENST00000423265 274 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 BX890604.2-201ENST00000427883 474 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 RPL32P28-201ENST00000443577 397 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC006480.1-201ENST00000449887 378 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 PDCD5P1-201ENST00000543528 309 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 MIR4319-201ENST00000577285 85 ntBASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ALMS1Q8TCU4 OR5H2-201ENST00000355273 945 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC104763.2-201ENST00000604179 382 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC005183.1-201ENST00000603687 1979 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms