Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13CQ709C8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 AC097504.1-201ENST00000515103 2415 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 Z93242.1-201ENST00000427102 353 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 AL356535.1-201ENST00000440335 398 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 TPTE2P3-201ENST00000441562 1189 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 VN1R48P-201ENST00000448149 1036 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 AC005798.1-201ENST00000513715 387 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 OR4R3P-201ENST00000525084 838 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 UBL5P2-201ENST00000583788 219 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 MRPS35P3-201ENST00000603189 709 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13CQ709C8 Z83843.1-201ENST00000604070 3685 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13CQ709C8 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13CQ709C8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13CQ709C8 RNA5SP52-201ENST00000362448 134 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 ATP5F1P6-201ENST00000402768 767 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC007899.1-201ENST00000412776 775 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 RPL6P21-201ENST00000418672 846 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 RPS29P21-201ENST00000496272 170 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 RNA5SP356-201ENST00000515972 94 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC006557.5-201ENST00000603126 811 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC006363.1-201ENST00000603806 463 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AL096803.3-201ENST00000609032 532 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13CQ709C8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC007390.2-201ENST00000606229 3803 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC010401.2-201ENST00000575137 4934 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13CQ709C8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 AF228730.2-201ENST00000438784 848 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC092809.1-201ENST00000441469 474 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13CQ709C8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC139713.2-215ENST00000641428 5037 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 HMGB3P20-201ENST00000417997 600 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 RPS12P18-201ENST00000442381 270 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 AL360157.1-201ENST00000565962 87 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC241585.2-209ENST00000638217 143 ntBASIC2.66□□□□□ -1.98
VPS13CQ709C8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS13CQ709C8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13CQ709C8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13CQ709C8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
VPS13CQ709C8 AC087312.1-201ENST00000471411 480 ntBASIC2.65□□□□□ -1.98
VPS13CQ709C8 AC234778.2-201ENST00000566241 354 ntBASIC2.65□□□□□ -1.98
VPS13CQ709C8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13CQ709C8 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.65□□□□□ -1.98
VPS13CQ709C8 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
VPS13CQ709C8 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13CQ709C8 AC021755.1-201ENST00000559747 1447 ntBASIC2.65□□□□□ -1.98
VPS13CQ709C8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13CQ709C8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC2.65□□□□□ -1.98
VPS13CQ709C8 AL121839.2-201ENST00000565058 6943 ntBASIC2.65□□□□□ -1.98
VPS13CQ709C8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 AC004024.1-201ENST00000549244 247 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 IPO8P1-201ENST00000455509 3109 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 AL359693.1-201ENST00000614959 2407 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 MIR22-201ENST00000362190 85 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 SNORA70B-201ENST00000384210 135 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 RPL35AP12-201ENST00000425362 338 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 HIGD1AP12-201ENST00000427832 281 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 snoU13.26-201ENST00000459452 105 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms