Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 AC090616.2-202ENST00000584248 222 ntBASIC4.85□□□□□ -1.63
VSTM1Q6UX27 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 RPL26P30-202ENST00000602923 645 ntBASIC4.85□□□□□ -1.63
VSTM1Q6UX27 AC115286.1-201ENST00000604298 434 ntBASIC4.85□□□□□ -1.63
VSTM1Q6UX27 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 AP001005.3-201ENST00000622049 129 ntBASIC4.85□□□□□ -1.63
VSTM1Q6UX27 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 AL445523.1-201ENST00000451184 1362 ntBASIC4.85□□□□□ -1.63
VSTM1Q6UX27 MTCO1P6-201ENST00000481192 1384 ntBASIC4.85□□□□□ -1.63
VSTM1Q6UX27 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.85□□□□□ -1.63
VSTM1Q6UX27 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 IGKV7-3-201ENST00000357453 298 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 RNU6-560P-201ENST00000364007 108 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 RNU6-553P-201ENST00000364047 96 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 RNU4-24P-201ENST00000364565 139 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 Y_RNA.408-201ENST00000383987 102 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 NRBF2P2-201ENST00000413087 861 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC098592.1-201ENST00000419352 333 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AL139421.1-201ENST00000423010 169 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 YWHAZP7-201ENST00000436906 631 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AL354941.1-201ENST00000438600 464 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 SYPL1P1-201ENST00000473622 768 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 HSPE1P23-201ENST00000509838 286 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 MTND5P13-201ENST00000513046 1079 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AP000619.3-201ENST00000535634 1127 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC015912.2-201ENST00000571053 181 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 MIR4666A-201ENST00000580160 79 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 EIF1P6-201ENST00000600054 334 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC096553.1-201ENST00000605169 829 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AL356218.2-201ENST00000605264 187 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC055764.2-201ENST00000610089 670 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC090246.1-201ENST00000616499 426 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC007494.3-201ENST00000624660 743 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 MIR4278-201ENST00000636094 69 ntBASIC4.84□□□□□ -1.63
VSTM1Q6UX27 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VSTM1Q6UX27 MFSD8-242ENST00000641690 4199 ntBASIC4.84□□□□□ -1.64
VSTM1Q6UX27 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
VSTM1Q6UX27 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
VSTM1Q6UX27 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VSTM1Q6UX27 RAD17P1-201ENST00000418130 2042 ntBASIC4.84□□□□□ -1.64
VSTM1Q6UX27 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.84□□□□□ -1.64
VSTM1Q6UX27 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AL391684.1-202ENST00000641293 1636 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC104118.1-201ENST00000607625 1589 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 MTND4P5-201ENST00000435821 1374 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 RNU1-94P-201ENST00000362627 173 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 SNORD116-4-201ENST00000384733 96 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 HDGFP1-201ENST00000405943 252 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 RNA5SP80-201ENST00000410475 111 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 RPL21P108-201ENST00000413857 481 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC007435.1-201ENST00000421086 415 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 GAPDHP49-201ENST00000421421 961 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 RPL18P10-201ENST00000425606 538 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AP001324.1-201ENST00000428553 399 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AL035407.1-201ENST00000429211 571 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 MTCO2P16-201ENST00000436962 677 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AL606662.1-201ENST00000445763 553 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 COX6CP18-201ENST00000448769 222 ntBASIC4.83□□□□□ -1.64
VSTM1Q6UX27 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.83□□□□□ -1.64
VSTM1Q6UX27 AL935212.3-201ENST00000450729 284 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms