Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AL590399.4-201ENST00000436561 601 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 RPL30P15-201ENST00000457129 321 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 RPL7P15-201ENST00000461190 712 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AL163973.1-201ENST00000484753 577 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC083904.1-201ENST00000487828 231 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 RNU6-273P-201ENST00000516937 96 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC022616.3-201ENST00000523940 148 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 OR5M2P-201ENST00000529003 936 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC125612.1-201ENST00000547580 377 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC092332.1-201ENST00000563684 829 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 RN7SL270P-201ENST00000579643 281 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 MIR4502-201ENST00000580432 81 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AL391813.2-201ENST00000609113 322 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 MIR1910-201ENST00000636955 80 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
FOXR1Q6PIV2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.46□□□□□ -1.37
FOXR1Q6PIV2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
FOXR1Q6PIV2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
FOXR1Q6PIV2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.37
FOXR1Q6PIV2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
FOXR1Q6PIV2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
FOXR1Q6PIV2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
FOXR1Q6PIV2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RNA5SP453-201ENST00000362503 119 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RNA5SP77-201ENST00000365394 120 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 U3.52-201ENST00000384034 216 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 MIR548K-201ENST00000408406 116 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RNA5SP431-201ENST00000410312 120 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AP000534.2-201ENST00000412729 568 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 MRPS21P5-201ENST00000417885 231 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RPS10P21-201ENST00000430654 475 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 EIF5AP4-201ENST00000441206 465 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 TXNP1-201ENST00000441872 371 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC092967.1-201ENST00000449016 481 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC144530.1-201ENST00000452862 555 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RN7SL552P-201ENST00000462094 276 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RPL7AP23-201ENST00000482625 776 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 HMGN1P16-201ENST00000508308 283 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 MTCYBP40-201ENST00000509390 1135 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC098591.2-201ENST00000510152 315 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 TMEM248P1-201ENST00000510579 951 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC018797.1-201ENST00000510791 255 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC097486.1-201ENST00000515331 210 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RNU6-1143P-201ENST00000516125 104 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 Y_RNA.668-201ENST00000516233 93 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 RNU6-1088P-201ENST00000516850 104 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC090572.1-201ENST00000519251 160 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 SUMO2P20-201ENST00000520803 283 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC106785.4-201ENST00000569492 412 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 OR1E3-201ENST00000575608 948 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC053481.3-201ENST00000577881 843 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 MIR3118-1-201ENST00000581787 76 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 MIR3942-201ENST00000585264 109 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC010149.2-201ENST00000637608 315 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 AC010325.3-201ENST00000641084 394 ntBASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms