Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC010307.1-201ENST00000467206 836 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 SIAH1P1-201ENST00000479411 923 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AL163540.1-201ENST00000485382 386 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC109481.1-201ENST00000509173 282 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 SNORA70.20-201ENST00000516848 126 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AP003467.2-201ENST00000520175 319 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AP001189.2-201ENST00000527320 189 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 PHBP17-201ENST00000528576 541 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF43Q68DV7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC138915.2-201ENST00000569776 97 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 NRBF2P1-201ENST00000587407 859 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 FO393422.1-201ENST00000603908 708 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC112187.2-201ENST00000604345 283 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC015908.5-201ENST00000623289 343 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC024560.2-201ENST00000507981 1497 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 CDR1-202ENST00000625883 1485 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC016745.2-201ENST00000608834 3443 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF43Q68DV7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 CASC19-221ENST00000641309 1382 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AP001350.1-201ENST00000601906 1524 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 NMD3P1-201ENST00000439704 1488 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC130304.1-201ENST00000622942 2385 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 RN7SKP162-201ENST00000363605 345 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 Y_RNA.381-201ENST00000365666 102 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 SNORA5.1-201ENST00000384275 131 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 RPL5P18-201ENST00000406671 891 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 RN7SKP29-201ENST00000410957 272 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC062016.2-201ENST00000420950 676 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 NIPA2P1-201ENST00000426223 976 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 Z82205.1-201ENST00000428456 297 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 RPL31P35-201ENST00000431058 377 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 MTND6P18-201ENST00000439477 513 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 MTND1P12-201ENST00000455231 147 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 MTND5P22-201ENST00000458380 195 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 Y_RNA.639-201ENST00000458981 102 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 MTND1P3-201ENST00000484956 952 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 RN7SL57P-201ENST00000493687 290 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 HMGB1P28-201ENST00000507778 552 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 COX6CP5-201ENST00000527162 228 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AL121594.2-201ENST00000541658 472 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC034105.3-201ENST00000565294 442 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AL139099.4-201ENST00000614802 114 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC037198.3-201ENST00000616754 526 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 MKKS-204ENST00000639674 192 ntBASIC6.05□□□□□ -1.44
RNF43Q68DV7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF43Q68DV7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms