Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.46-201ENST00000362695 102 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 RNU6-582P-201ENST00000362989 107 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.482-201ENST00000384377 111 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 RNA5SP284-201ENST00000384547 118 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 RNU6-823P-201ENST00000391042 103 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AL096800.1-201ENST00000405326 893 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC017078.1-201ENST00000416146 368 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 COX6CP17-201ENST00000421389 185 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC096775.1-201ENST00000437724 448 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AL356010.1-201ENST00000456364 102 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC110749.1-201ENST00000462007 357 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC097493.1-201ENST00000463958 372 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 PFN1P6-201ENST00000476786 399 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 FO393415.2-201ENST00000480085 343 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 RN7SL382P-201ENST00000482631 282 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 RPS26P24-201ENST00000497656 331 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC008638.1-201ENST00000506035 866 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 RN7SKP92-201ENST00000517266 244 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC008562.1-201ENST00000521763 330 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 DUX4L52-201ENST00000549363 777 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 RN7SL208P-201ENST00000577964 296 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 SS18L2P2-201ENST00000583960 235 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC027575.3-201ENST00000583058 2747 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC097714.1-201ENST00000511272 1647 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC009120.2-204ENST00000621548 2032 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 AC091812.1-201ENST00000432235 1948 ntBASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTC1Q2NKJ3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AP003175.1-201ENST00000641383 6658 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL139384.2-201ENST00000613809 3590 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 MIR323A-201ENST00000362199 86 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 RNU6-1097P-201ENST00000363586 107 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 RNU6-740P-201ENST00000364734 105 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 RNU6-532P-201ENST00000384318 107 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 RNU6-606P-201ENST00000384721 111 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL121972.1-201ENST00000402023 252 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 MIR1302-6-201ENST00000408466 90 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC093155.2-201ENST00000420734 937 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 BX510359.3-201ENST00000422168 306 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 SKA2P1-201ENST00000425592 390 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC006548.1-201ENST00000427470 102 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 RPL31P44-201ENST00000447680 377 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC092647.2-201ENST00000452998 253 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 RPL39P38-201ENST00000467018 153 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 RPL12P31-201ENST00000478433 450 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC090572.1-201ENST00000519251 160 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC022616.3-201ENST00000523940 148 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms