Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 AL357552.1-201ENST00000445254 415 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 AC239367.2-201ENST00000447309 705 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 RPL21P129-201ENST00000491732 478 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GTF2BQ00403 AC092851.1-201ENST00000535964 478 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 CCNG2P1-201ENST00000549521 1000 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 AC007424.1-203ENST00000554613 687 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 MIR1254-2-201ENST00000579553 63 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 AC092354.2-201ENST00000607786 514 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 AL357559.1-201ENST00000622228 274 ntBASIC3.81□□□□□ -1.8
GTF2BQ00403 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
GTF2BQ00403 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.8□□□□□ -1.8
GTF2BQ00403 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 RNU4-35P-201ENST00000362588 141 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
GTF2BQ00403 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.8□□□□□ -1.8
GTF2BQ00403 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.8□□□□□ -1.8
GTF2BQ00403 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.8□□□□□ -1.8
GTF2BQ00403 AC044797.1-201ENST00000445744 679 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.8□□□□□ -1.8
GTF2BQ00403 AC025518.1-201ENST00000479856 347 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 AP000563.1-201ENST00000490865 758 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 AC092045.1-201ENST00000495716 1231 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
GTF2BQ00403 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
GTF2BQ00403 HMGB1P23-201ENST00000518743 568 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.8□□□□□ -1.8
GTF2BQ00403 AC091515.1-201ENST00000548110 679 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.8□□□□□ -1.8
GTF2BQ00403 MIR4429-201ENST00000580105 73 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
GTF2BQ00403 AC110741.2-201ENST00000605278 268 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 U3.45-201ENST00000607547 219 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 AP006248.2-201ENST00000623309 592 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
GTF2BQ00403 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 AL451142.2-201ENST00000429076 2090 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2BQ00403 AC032011.1-201ENST00000611703 1549 ntBASIC3.8□□□□□ -1.8
GTF2BQ00403 AC106871.1-201ENST00000568324 3102 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.79□□□□□ -1.8
GTF2BQ00403 MTND4P10-201ENST00000446199 1363 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 AL645937.1-201ENST00000641739 1652 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2BQ00403 RNU6-697P-201ENST00000363348 107 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2BQ00403 SNORA48.7-201ENST00000391302 135 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 AC093719.1-202ENST00000392735 373 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2BQ00403 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.79□□□□□ -1.8
GTF2BQ00403 HMGB3P18-201ENST00000406327 590 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 SNORA11-201ENST00000408789 128 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.79□□□□□ -1.8
GTF2BQ00403 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2BQ00403 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2BQ00403 DPY19L1P2-201ENST00000426647 915 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 AP000907.1-201ENST00000428428 510 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 ARL4AP4-201ENST00000434170 518 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2BQ00403 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2BQ00403 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2BQ00403 NPM1P52-201ENST00000518264 846 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 IGKV2-26-201ENST00000518305 343 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2BQ00403 OR8I1P-201ENST00000529291 931 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 AC007458.1-201ENST00000542812 373 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2BQ00403 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.79□□□□□ -1.8
GTF2BQ00403 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.79□□□□□ -1.8
GTF2BQ00403 AC017076.1-201ENST00000607613 578 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2BQ00403 AC009950.2-201ENST00000636548 183 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
GTF2BQ00403 HSPA8P1-201ENST00000425843 1833 ntBASIC3.79□□□□□ -1.8
GTF2BQ00403 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2BQ00403 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.79□□□□□ -1.8
GTF2BQ00403 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF2BQ00403 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF2BQ00403 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
GTF2BQ00403 AL049555.1-201ENST00000562834 1933 ntBASIC3.78□□□□□ -1.8
GTF2BQ00403 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF2BQ00403 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF2BQ00403 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF2BQ00403 MIR423-201ENST00000362201 94 ntBASIC3.78□□□□□ -1.8
GTF2BQ00403 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF2BQ00403 AC234772.1-201ENST00000377927 937 ntBASIC3.78□□□□□ -1.8
GTF2BQ00403 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.78□□□□□ -1.8
GTF2BQ00403 RNA5SP239-201ENST00000410218 129 ntBASIC3.78□□□□□ -1.8
GTF2BQ00403 AC245052.5-201ENST00000416320 649 ntBASIC3.78□□□□□ -1.8
GTF2BQ00403 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.78□□□□□ -1.8
GTF2BQ00403 AL050321.1-201ENST00000432363 400 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms