Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MTCYBP37-201ENST00000510642 1133 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.82□□□□□ -1.8
CX3CL1P78423 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CL1P78423 PTP4A1P6-201ENST00000531034 478 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 SLC2A13P1-201ENST00000531560 322 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CL1P78423 AC090502.2-201ENST00000549267 280 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC125611.1-201ENST00000549563 229 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AL389895.1-201ENST00000554127 252 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC009712.1-201ENST00000564938 316 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.82□□□□□ -1.8
CX3CL1P78423 AC079171.1-201ENST00000568788 914 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 RN7SL802P-201ENST00000577858 299 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC022726.1-201ENST00000587475 207 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CL1P78423 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CL1P78423 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.82□□□□□ -1.8
CX3CL1P78423 RPL26P30-202ENST00000602923 645 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC021171.1-201ENST00000603137 706 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 DPRXP5-201ENST00000604662 539 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AC000123.2-201ENST00000623124 461 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 AP000843.1-201ENST00000624880 701 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CX3CL1P78423 TLK1P1-201ENST00000456760 2440 ntBASIC3.82□□□□□ -1.8
CX3CL1P78423 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
CX3CL1P78423 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 LINC01109-201ENST00000603837 3081 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CX3CL1P78423 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CL1P78423 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CL1P78423 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC008549.2-201ENST00000333482 706 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 RNU6-216P-201ENST00000363282 104 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 RNU1-83P-201ENST00000363426 164 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 MIR506-201ENST00000384998 124 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 MIR195-201ENST00000385194 87 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AL109941.1-201ENST00000401925 229 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC073264.1-201ENST00000411508 416 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.81□□□□□ -1.8
CX3CL1P78423 COX6CP15-201ENST00000426313 211 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC008065.1-201ENST00000428525 348 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.81□□□□□ -1.8
CX3CL1P78423 VN1R54P-201ENST00000435210 1049 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AURKAPS2-201ENST00000454983 333 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 MTCO3P2-201ENST00000457365 171 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 OR4G11P-201ENST00000492842 939 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.81□□□□□ -1.8
CX3CL1P78423 HMGB1P28-201ENST00000507778 552 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 RNY4P37-201ENST00000516225 96 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 RN7SKP277-201ENST00000516895 283 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 MTND2P38-201ENST00000522536 667 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC133555.2-201ENST00000550213 292 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC087477.6-201ENST00000559595 843 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 BGLT3-201ENST00000564523 994 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 ATP5J2P6-201ENST00000565203 266 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CL1P78423 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC005084.1-201ENST00000605160 304 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC091979.2-201ENST00000607514 214 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 FAM27B-201ENST00000610601 213 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC009237.17-201ENST00000618111 748 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC068722.2-201ENST00000618734 544 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 Z99129.2-201ENST00000619967 314 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC079416.3-201ENST00000624479 549 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 AC092184.1-201ENST00000625042 715 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.81□□□□□ -1.8
CX3CL1P78423 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CX3CL1P78423 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC027290.2-201ENST00000623210 18662 ntBASIC3.81□□□□□ -1.8
CX3CL1P78423 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CX3CL1P78423 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.81□□□□□ -1.8
CX3CL1P78423 AC091046.3-201ENST00000631455 1574 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 SAGE4P-201ENST00000442271 3381 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AL592182.3-201ENST00000642132 3304 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 NCLP2-201ENST00000416078 1462 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms