Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNA1P78396 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.37□□□□□ -1.71
CCNA1P78396 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNA1P78396 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCNA1P78396 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNA1P78396 RNU4-23P-201ENST00000362839 140 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 RNU6-564P-201ENST00000410983 104 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 ATP5A1P2-201ENST00000412323 255 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.37□□□□□ -1.71
CCNA1P78396 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.37□□□□□ -1.71
CCNA1P78396 AP000907.1-201ENST00000428428 510 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.37□□□□□ -1.71
CCNA1P78396 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.37□□□□□ -1.71
CCNA1P78396 SNRPGP5-201ENST00000456003 220 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.37□□□□□ -1.71
CCNA1P78396 SNORD105B-201ENST00000458770 79 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.37□□□□□ -1.71
CCNA1P78396 SNORA74D-201ENST00000516404 141 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.37□□□□□ -1.71
CCNA1P78396 CYP4A43P-201ENST00000568156 121 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 MIR548Y-201ENST00000582739 110 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.37□□□□□ -1.71
CCNA1P78396 AL139286.1-201ENST00000604465 483 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 MIR7975-201ENST00000619350 68 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CCNA1P78396 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CCNA1P78396 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCNA1P78396 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.37□□□□□ -1.71
CCNA1P78396 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNA1P78396 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNA1P78396 MTND4P26-201ENST00000415971 1359 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCNA1P78396 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCNA1P78396 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCNA1P78396 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCNA1P78396 AC095050.2-201ENST00000510748 1458 ntBASIC4.37□□□□□ -1.71
CCNA1P78396 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNA1P78396 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNA1P78396 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.36□□□□□ -1.71
CCNA1P78396 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNA1P78396 RNA5SP51-201ENST00000364750 119 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCNA1P78396 MIR3074-201ENST00000384885 81 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 AC091390.3-201ENST00000426478 338 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 MAPRE1P3-201ENST00000435438 796 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.36□□□□□ -1.71
CCNA1P78396 AL353093.1-201ENST00000441292 436 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 Z99127.2-201ENST00000441426 334 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 MTND2P8-201ENST00000450555 1025 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 AC026427.2-201ENST00000506228 536 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 AC016550.3-201ENST00000515706 767 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.36□□□□□ -1.71
CCNA1P78396 AC006960.3-201ENST00000561845 705 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 AP001180.3-201ENST00000582221 145 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.36□□□□□ -1.71
CCNA1P78396 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.36□□□□□ -1.71
CCNA1P78396 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.36□□□□□ -1.71
CCNA1P78396 MIR7154-201ENST00000620673 73 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 C2orf27A-204ENST00000623058 969 ntBASIC4.36□□□□□ -1.71
CCNA1P78396 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.36□□□□□ -1.71
CCNA1P78396 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CCNA1P78396 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNA1P78396 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
CCNA1P78396 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNA1P78396 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNA1P78396 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCNA1P78396 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNA1P78396 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNA1P78396 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNA1P78396 AC234772.1-201ENST00000377927 937 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 AC245052.5-201ENST00000416320 649 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 ELOCP6-201ENST00000429066 328 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 AL159987.2-201ENST00000432754 307 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 MED6P1-201ENST00000439659 713 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 ELOCP12-201ENST00000458706 328 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 AC005726.1-201ENST00000494679 427 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 RPL30P11-201ENST00000495304 339 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 AL358832.1-201ENST00000497800 389 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 OR5B10P-201ENST00000532869 642 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNA1P78396 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNA1P78396 MTND6P33-201ENST00000571794 183 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 MIR3922-201ENST00000585192 84 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNA1P78396 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.35□□□□□ -1.71
CCNA1P78396 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.35□□□□□ -1.71
CCNA1P78396 AL031666.3-201ENST00000609320 1006 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 AC243312.2-201ENST00000623340 601 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 AL773545.4-201ENST00000637262 310 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 AL513478.4-201ENST00000641636 310 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 OR5AC4P-202ENST00000642086 985 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNA1P78396 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCNA1P78396 KPNA2P2-201ENST00000419546 1489 ntBASIC4.35□□□□□ -1.71
CCNA1P78396 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNA1P78396 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCNA1P78396 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
CCNA1P78396 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNA1P78396 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNA1P78396 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms