Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.68□□□□□ -1.5
CNGA1P29973 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNGA1P29973 BX323845.1-201ENST00000432417 179 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.68□□□□□ -1.5
CNGA1P29973 MTND2P4-201ENST00000445034 1004 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.68□□□□□ -1.5
CNGA1P29973 RPS27AP8-201ENST00000452665 445 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.68□□□□□ -1.5
CNGA1P29973 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.68□□□□□ -1.5
CNGA1P29973 AC010326.1-201ENST00000462726 602 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 NCOR1P1-202ENST00000486162 291 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.68□□□□□ -1.5
CNGA1P29973 AC093281.2-201ENST00000510153 597 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.68□□□□□ -1.5
CNGA1P29973 OR4A12P-201ENST00000530847 918 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.68□□□□□ -1.5
CNGA1P29973 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.68□□□□□ -1.5
CNGA1P29973 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.68□□□□□ -1.5
CNGA1P29973 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.68□□□□□ -1.5
CNGA1P29973 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.68□□□□□ -1.5
CNGA1P29973 AL122125.1-201ENST00000616999 600 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CNGA1P29973 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CNGA1P29973 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNGA1P29973 AC025574.1-201ENST00000554784 1653 ntBASIC5.68□□□□□ -1.5
CNGA1P29973 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNGA1P29973 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.68□□□□□ -1.5
CNGA1P29973 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CNGA1P29973 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.68□□□□□ -1.5
CNGA1P29973 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNGA1P29973 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.67□□□□□ -1.5
CNGA1P29973 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CNGA1P29973 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CNGA1P29973 SNRPEP3-201ENST00000338402 276 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CNGA1P29973 RNU6-984P-201ENST00000363236 109 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 AC068538.1-201ENST00000376856 336 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 MIR649-201ENST00000384843 97 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 VDAC2P1-201ENST00000399358 958 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 RPS3AP23-201ENST00000401762 784 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 RNU2-21P-201ENST00000410368 188 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 OR6C64P-201ENST00000419708 825 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.67□□□□□ -1.5
CNGA1P29973 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 BX842559.2-201ENST00000451418 605 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.67□□□□□ -1.5
CNGA1P29973 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 AC104685.1-201ENST00000502445 371 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.67□□□□□ -1.5
CNGA1P29973 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.67□□□□□ -1.5
CNGA1P29973 RNU6-678P-201ENST00000516832 109 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.67□□□□□ -1.5
CNGA1P29973 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.67□□□□□ -1.5
CNGA1P29973 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.67□□□□□ -1.5
CNGA1P29973 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.67□□□□□ -1.5
CNGA1P29973 MTCYBP13-201ENST00000578634 1093 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 AP005136.1-201ENST00000579765 429 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 VN1R92P-201ENST00000598511 928 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 AC020910.3-201ENST00000603701 874 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 AC105129.3-201ENST00000605455 485 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 AC245008.1-201ENST00000608123 476 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 AC008083.4-201ENST00000615076 444 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 AF246928.1-201ENST00000623768 87 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 AC092184.1-201ENST00000625042 715 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 AC090971.4-201ENST00000560291 1800 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 ZNF37BP-203ENST00000452306 1352 ntBASIC5.67□□□□□ -1.5
CNGA1P29973 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.67□□□□□ -1.5
CNGA1P29973 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CNGA1P29973 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNGA1P29973 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.67□□□□□ -1.5
CNGA1P29973 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CNGA1P29973 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 AC011155.1-201ENST00000316512 456 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 RNU1-85P-201ENST00000364127 164 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 RNU6-253P-201ENST00000384730 105 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms