Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL163642.2-201ENST00000604722 1019 ntBASIC4.78□□□□□ -1.64
MMP8P22894 AC124312.4-201ENST00000605533 310 ntBASIC4.78□□□□□ -1.64
MMP8P22894 AL355816.1-201ENST00000607951 118 ntBASIC4.78□□□□□ -1.64
MMP8P22894 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.78□□□□□ -1.64
MMP8P22894 MIR6780A-201ENST00000615089 68 ntBASIC4.78□□□□□ -1.64
MMP8P22894 AC091931.1-201ENST00000623488 728 ntBASIC4.78□□□□□ -1.64
MMP8P22894 AC079248.2-201ENST00000623779 326 ntBASIC4.78□□□□□ -1.64
MMP8P22894 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MMP8P22894 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.78□□□□□ -1.64
MMP8P22894 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MMP8P22894 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.78□□□□□ -1.64
MMP8P22894 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MMP8P22894 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
MMP8P22894 AC139769.1-204ENST00000472297 1931 ntBASIC4.78□□□□□ -1.64
MMP8P22894 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.77□□□□□ -1.65
MMP8P22894 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 SNORD113.2-201ENST00000364166 89 ntBASIC4.77□□□□□ -1.65
MMP8P22894 RNVU1-6-201ENST00000364688 164 ntBASIC4.77□□□□□ -1.65
MMP8P22894 RNU1-63P-201ENST00000383902 164 ntBASIC4.77□□□□□ -1.65
MMP8P22894 RN7SKP167-201ENST00000411047 285 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AL136133.1-201ENST00000413694 376 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.77□□□□□ -1.65
MMP8P22894 AC062016.2-201ENST00000420950 676 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AC004448.2-201ENST00000422360 586 ntBASIC4.77□□□□□ -1.65
MMP8P22894 SKP1P3-201ENST00000429280 487 ntBASIC4.77□□□□□ -1.65
MMP8P22894 VN1R108P-201ENST00000431580 830 ntBASIC4.77□□□□□ -1.65
MMP8P22894 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP8P22894 GSTA7P-201ENST00000438425 448 ntBASIC4.77□□□□□ -1.65
MMP8P22894 RPL23AP93-201ENST00000440847 484 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP8P22894 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 AL591503.2-201ENST00000442314 1005 ntBASIC4.77□□□□□ -1.65
MMP8P22894 RPL23AP43-201ENST00000446445 471 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.77□□□□□ -1.65
MMP8P22894 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.77□□□□□ -1.65
MMP8P22894 AL513533.1-201ENST00000453728 415 ntBASIC4.77□□□□□ -1.65
MMP8P22894 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 UBA52P3-201ENST00000491303 382 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AC111000.2-201ENST00000507775 550 ntBASIC4.77□□□□□ -1.65
MMP8P22894 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
MMP8P22894 HSPE1P23-201ENST00000509838 286 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP8P22894 AC117532.1-201ENST00000514638 323 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AP001207.1-201ENST00000524051 481 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.77□□□□□ -1.65
MMP8P22894 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.77□□□□□ -1.65
MMP8P22894 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP8P22894 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.77□□□□□ -1.65
MMP8P22894 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP8P22894 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP8P22894 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP8P22894 AL390838.2-201ENST00000602394 274 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AC103792.1-201ENST00000603591 919 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AC010201.1-201ENST00000605051 540 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.77□□□□□ -1.65
MMP8P22894 AP001784.1-201ENST00000624107 428 ntBASIC4.77□□□□□ -1.65
MMP8P22894 AC139792.2-201ENST00000624218 587 ntBASIC4.77□□□□□ -1.65
MMP8P22894 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.77□□□□□ -1.65
MMP8P22894 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.77□□□□□ -1.65
MMP8P22894 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MMP8P22894 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
MMP8P22894 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP8P22894 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MMP8P22894 NXPH1-205ENST00000602349 1953 ntBASIC4.76□□□□□ -1.65
MMP8P22894 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP8P22894 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP8P22894 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP8P22894 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP8P22894 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP8P22894 Y_RNA.318-201ENST00000365131 97 ntBASIC4.76□□□□□ -1.65
MMP8P22894 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP8P22894 AL139098.1-201ENST00000407291 389 ntBASIC4.76□□□□□ -1.65
MMP8P22894 RNU2-65P-201ENST00000410162 185 ntBASIC4.76□□□□□ -1.65
MMP8P22894 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.76□□□□□ -1.65
MMP8P22894 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP8P22894 BOLA3P4-201ENST00000418151 400 ntBASIC4.76□□□□□ -1.65
MMP8P22894 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.76□□□□□ -1.65
MMP8P22894 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.76□□□□□ -1.65
MMP8P22894 NPM1P24-201ENST00000428039 894 ntBASIC4.76□□□□□ -1.65
MMP8P22894 AL390023.1-201ENST00000428836 262 ntBASIC4.76□□□□□ -1.65
MMP8P22894 AL050321.1-201ENST00000432363 400 ntBASIC4.76□□□□□ -1.65
MMP8P22894 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.76□□□□□ -1.65
MMP8P22894 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.76□□□□□ -1.65
MMP8P22894 THAP5P1-201ENST00000439089 262 ntBASIC4.76□□□□□ -1.65
MMP8P22894 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.76□□□□□ -1.65
MMP8P22894 ELOCP10-201ENST00000440624 327 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms