Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL034408.1-202ENST00000636088 415 ntBASIC3.04□□□□□ -1.92
CD28P10747 AF001550.2-201ENST00000636643 217 ntBASIC3.04□□□□□ -1.92
CD28P10747 AC010733.2-201ENST00000589496 5702 ntBASIC3.04□□□□□ -1.92
CD28P10747 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD28P10747 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.04□□□□□ -1.92
CD28P10747 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.04□□□□□ -1.92
CD28P10747 AC106871.1-201ENST00000568324 3102 ntBASIC3.04□□□□□ -1.92
CD28P10747 PNPT1P2-201ENST00000456768 2050 ntBASIC3.04□□□□□ -1.92
CD28P10747 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
CD28P10747 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD28P10747 GTF2H2B-203ENST00000508065 1432 ntBASIC3.03□□□□□ -1.92
CD28P10747 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CD28P10747 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.03□□□□□ -1.92
CD28P10747 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CD28P10747 AC068254.2-201ENST00000623938 3577 ntBASIC3.03□□□□□ -1.92
CD28P10747 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD28P10747 RNA5SP387-201ENST00000364226 106 ntBASIC3.03□□□□□ -1.92
CD28P10747 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.03□□□□□ -1.92
CD28P10747 NPM1P10-201ENST00000398310 865 ntBASIC3.03□□□□□ -1.92
CD28P10747 ZNF602P-201ENST00000405929 924 ntBASIC3.03□□□□□ -1.92
CD28P10747 RNA5SP44-201ENST00000410446 133 ntBASIC3.03□□□□□ -1.92
CD28P10747 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 YWHAEP5-201ENST00000431545 765 ntBASIC3.03□□□□□ -1.92
CD28P10747 ZNF965P-201ENST00000432501 817 ntBASIC3.03□□□□□ -1.92
CD28P10747 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CD28P10747 RPS15AP29-201ENST00000445539 400 ntBASIC3.03□□□□□ -1.92
CD28P10747 HMGB1P16-201ENST00000447155 540 ntBASIC3.03□□□□□ -1.92
CD28P10747 NANOGP10-201ENST00000453325 895 ntBASIC3.03□□□□□ -1.92
CD28P10747 RPL7L1P8-201ENST00000469911 741 ntBASIC3.03□□□□□ -1.92
CD28P10747 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 S100A11P1-201ENST00000477525 312 ntBASIC3.03□□□□□ -1.92
CD28P10747 MTND6P6-201ENST00000478031 263 ntBASIC3.03□□□□□ -1.92
CD28P10747 AC006517.1-201ENST00000480485 328 ntBASIC3.03□□□□□ -1.92
CD28P10747 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 RNU1-95P-201ENST00000516357 160 ntBASIC3.03□□□□□ -1.92
CD28P10747 RNU1-128P-201ENST00000516704 160 ntBASIC3.03□□□□□ -1.92
CD28P10747 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.03□□□□□ -1.92
CD28P10747 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.03□□□□□ -1.92
CD28P10747 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 HAUS1P3-201ENST00000523909 662 ntBASIC3.03□□□□□ -1.92
CD28P10747 OR4A12P-201ENST00000530847 918 ntBASIC3.03□□□□□ -1.92
CD28P10747 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.03□□□□□ -1.92
CD28P10747 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.03□□□□□ -1.92
CD28P10747 AC106785.3-201ENST00000564064 847 ntBASIC3.03□□□□□ -1.92
CD28P10747 AC022968.1-201ENST00000567372 442 ntBASIC3.03□□□□□ -1.92
CD28P10747 MTND4LP24-201ENST00000572277 291 ntBASIC3.03□□□□□ -1.92
CD28P10747 AC011374.2-201ENST00000607135 526 ntBASIC3.03□□□□□ -1.92
CD28P10747 AC069200.1-201ENST00000609511 323 ntBASIC3.03□□□□□ -1.92
CD28P10747 AC110792.4-201ENST00000609843 298 ntBASIC3.03□□□□□ -1.92
CD28P10747 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.03□□□□□ -1.92
CD28P10747 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CD28P10747 AC095038.2-201ENST00000621464 1070 ntBASIC3.03□□□□□ -1.92
CD28P10747 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD28P10747 ZNF90P1-201ENST00000480493 1951 ntBASIC3.03□□□□□ -1.92
CD28P10747 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CD28P10747 AL353743.4-201ENST00000422653 1547 ntBASIC3.03□□□□□ -1.92
CD28P10747 AL133412.1-201ENST00000380194 2992 ntBASIC3.03□□□□□ -1.93
CD28P10747 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CD28P10747 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
CD28P10747 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.93
CD28P10747 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CD28P10747 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CD28P10747 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CD28P10747 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD28P10747 AC022031.1-201ENST00000585985 2593 ntBASIC3.02□□□□□ -1.93
CD28P10747 MIR208A-201ENST00000362287 71 ntBASIC3.02□□□□□ -1.93
CD28P10747 RNU1-87P-201ENST00000363727 170 ntBASIC3.02□□□□□ -1.93
CD28P10747 SNORD46.1-201ENST00000364139 104 ntBASIC3.02□□□□□ -1.93
CD28P10747 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CD28P10747 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CD28P10747 SNORA5A-201ENST00000384111 134 ntBASIC3.02□□□□□ -1.93
CD28P10747 SNORD3H-201ENST00000384486 214 ntBASIC3.02□□□□□ -1.93
CD28P10747 MIR7-3-201ENST00000384898 110 ntBASIC3.02□□□□□ -1.93
CD28P10747 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.02□□□□□ -1.93
CD28P10747 SNORA3C-201ENST00000408792 125 ntBASIC3.02□□□□□ -1.93
CD28P10747 RNA5SP306-201ENST00000411087 107 ntBASIC3.02□□□□□ -1.93
CD28P10747 AC093578.1-201ENST00000415219 368 ntBASIC3.02□□□□□ -1.93
CD28P10747 CRYBB2P1-203ENST00000415709 538 ntBASIC3.02□□□□□ -1.93
CD28P10747 RPL30P3-201ENST00000424262 333 ntBASIC3.02□□□□□ -1.93
CD28P10747 AC091286.1-201ENST00000431233 461 ntBASIC3.02□□□□□ -1.93
CD28P10747 BX119904.1-201ENST00000432026 348 ntBASIC3.02□□□□□ -1.93
CD28P10747 AL050321.1-201ENST00000432363 400 ntBASIC3.02□□□□□ -1.93
CD28P10747 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.02□□□□□ -1.93
CD28P10747 MTND2P21-201ENST00000436242 1042 ntBASIC3.02□□□□□ -1.93
CD28P10747 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.02□□□□□ -1.93
CD28P10747 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.02□□□□□ -1.93
CD28P10747 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.02□□□□□ -1.93
CD28P10747 RPL7P49-201ENST00000471402 708 ntBASIC3.02□□□□□ -1.93
CD28P10747 AC025181.1-201ENST00000477507 416 ntBASIC3.02□□□□□ -1.93
CD28P10747 RN7SL271P-201ENST00000487601 295 ntBASIC3.02□□□□□ -1.93
CD28P10747 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.02□□□□□ -1.93
CD28P10747 AC025554.1-201ENST00000505641 188 ntBASIC3.02□□□□□ -1.93
CD28P10747 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.02□□□□□ -1.93
CD28P10747 HMGN1P11-201ENST00000508668 303 ntBASIC3.02□□□□□ -1.93
CD28P10747 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.02□□□□□ -1.93
CD28P10747 SCARNA14-201ENST00000516903 136 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms