Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 RN7SKP46-201ENST00000515942 234 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.91□□□□□ -1.62
PHGDHO43175 AC008802.1-201ENST00000519121 791 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 AC023161.2-201ENST00000551218 780 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.91□□□□□ -1.62
PHGDHO43175 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.91□□□□□ -1.62
PHGDHO43175 KPNA2P3-201ENST00000584190 848 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 BNIP3P11-201ENST00000603878 563 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 RNU6-88P-201ENST00000606801 100 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AC078899.5-201ENST00000612475 178 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PHGDHO43175 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.91□□□□□ -1.62
PHGDHO43175 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.91□□□□□ -1.62
PHGDHO43175 CASC19-222ENST00000641321 1173 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PHGDHO43175 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
PHGDHO43175 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.91□□□□□ -1.62
PHGDHO43175 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 AC083843.3-201ENST00000623679 2186 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.91□□□□□ -1.62
PHGDHO43175 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PHGDHO43175 LINC00561-201ENST00000565815 2738 ntBASIC4.9□□□□□ -1.62
PHGDHO43175 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PHGDHO43175 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PHGDHO43175 RNU6-1243P-201ENST00000364028 107 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 SNORA66-201ENST00000384792 133 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 Z99497.1-201ENST00000421282 135 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 RPL30P3-201ENST00000424262 333 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PHGDHO43175 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.9□□□□□ -1.63
PHGDHO43175 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.9□□□□□ -1.63
PHGDHO43175 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.9□□□□□ -1.63
PHGDHO43175 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.9□□□□□ -1.63
PHGDHO43175 UBE2FP3-201ENST00000436366 524 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 KATNBL1P6-201ENST00000453433 915 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 RPS15AP17-201ENST00000470598 390 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.9□□□□□ -1.63
PHGDHO43175 AC090013.1-201ENST00000485147 480 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AC006499.2-201ENST00000513470 337 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.9□□□□□ -1.63
PHGDHO43175 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.9□□□□□ -1.63
PHGDHO43175 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.9□□□□□ -1.63
PHGDHO43175 HIGD1AP10-201ENST00000527837 282 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.9□□□□□ -1.63
PHGDHO43175 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PHGDHO43175 AC137768.1-201ENST00000549998 553 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 NMNAT1P1-201ENST00000554095 876 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 MIR4637-201ENST00000582405 84 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.9□□□□□ -1.63
PHGDHO43175 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.9□□□□□ -1.63
PHGDHO43175 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.9□□□□□ -1.63
PHGDHO43175 AP001981.2-201ENST00000603241 418 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AL512329.2-201ENST00000607350 548 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AL158063.1-201ENST00000615349 536 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AL049794.2-201ENST00000616301 365 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AC018816.2-201ENST00000621460 353 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 AL356266.1-201ENST00000623311 483 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.9□□□□□ -1.63
PHGDHO43175 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.9□□□□□ -1.63
PHGDHO43175 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.9□□□□□ -1.63
PHGDHO43175 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.9□□□□□ -1.63
PHGDHO43175 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PHGDHO43175 AC090971.4-201ENST00000560291 1800 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PHGDHO43175 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.9□□□□□ -1.63
PHGDHO43175 ELL2P4-201ENST00000446870 1376 ntBASIC4.9□□□□□ -1.63
PHGDHO43175 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PHGDHO43175 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 AC021242.1-201ENST00000507315 2035 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AC107068.1-201ENST00000563286 4218 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PHGDHO43175 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.89□□□□□ -1.63
PHGDHO43175 AL672167.1-206ENST00000356293 943 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 RNU6-1226P-201ENST00000384317 107 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 SSXP10-201ENST00000402595 565 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.89□□□□□ -1.63
PHGDHO43175 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.89□□□□□ -1.63
PHGDHO43175 RN7SKP125-201ENST00000410481 302 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PHGDHO43175 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.89□□□□□ -1.63
PHGDHO43175 AL358176.3-201ENST00000420757 454 ntBASIC4.89□□□□□ -1.63
PHGDHO43175 CKS1BP6-201ENST00000424932 240 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms