Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 MTCO1P7-201ENST00000419523 1542 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AL049634.1-201ENST00000453770 1720 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.167-201ENST00000363735 109 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 RNU4-2-201ENST00000365668 141 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 RNU6-328P-201ENST00000390887 106 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 RNU6-101P-201ENST00000410323 104 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC005019.1-201ENST00000436455 431 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 YWHAZP8-201ENST00000436935 731 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 RANP2-201ENST00000456833 229 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 SNX18P26-201ENST00000458433 740 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 WBP1LP3-201ENST00000523033 208 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC010547.6-201ENST00000571789 193 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 SDR42E1P1-201ENST00000611327 477 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC069234.4-201ENST00000621276 412 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC145207.9-201ENST00000623802 325 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AL132640.3-201ENST00000630473 177 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 KPNA2P2-201ENST00000419546 1489 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 USP9YP4-201ENST00000424401 1745 ntBASIC8.49□□□□□ -1.05
PHF8Q9UPP1 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.49□□□□□ -1.05
PHF8Q9UPP1 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AC110716.2-201ENST00000563865 3945 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 SNORD3E-201ENST00000362899 217 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.512-201ENST00000384518 102 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AC091390.2-201ENST00000432573 374 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 MED28P3-201ENST00000444288 531 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AL445466.1-201ENST00000448432 357 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 GEMIN2P1-201ENST00000454246 752 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AL122020.1-201ENST00000472287 459 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AC090453.1-201ENST00000495560 436 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 GZMAP1-201ENST00000503054 631 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AC008562.1-201ENST00000521763 330 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 MTND4P7-201ENST00000523876 130 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AP000907.2-201ENST00000530827 353 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AC138761.3-201ENST00000579993 334 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 MIR4776-2-201ENST00000580204 80 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 MIR3672-201ENST00000584290 82 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AC023043.2-201ENST00000589678 1026 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AL355297.3-201ENST00000604082 446 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 U6.101-201ENST00000637707 76 ntBASIC8.48□□□□□ -1.05
PHF8Q9UPP1 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PHF8Q9UPP1 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
PHF8Q9UPP1 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.47□□□□□ -1.05
PHF8Q9UPP1 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
PHF8Q9UPP1 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PHF8Q9UPP1 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.47□□□□□ -1.05
PHF8Q9UPP1 RNU6-1252P-201ENST00000363054 104 ntBASIC8.47□□□□□ -1.05
PHF8Q9UPP1 RNU1-115P-201ENST00000365329 160 ntBASIC8.47□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.378-201ENST00000365652 113 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms