Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC105272.1-201ENST00000438604 198 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 RPS27AP10-201ENST00000496103 208 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AC092436.1-201ENST00000506450 503 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 APOOP1-201ENST00000604695 592 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AC117529.2-201ENST00000512159 2068 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AC234781.5-201ENST00000508429 271 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 Y_RNA.681-201ENST00000516445 113 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AC022695.1-201ENST00000522089 237 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 RNVU1-4-201ENST00000612985 164 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AC138907.10-201ENST00000623708 983 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AL513302.2-201ENST00000562313 1842 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 AP000553.6-201ENST00000641242 118 ntBASIC1.45□□□□□ -2.18
MACF1Q9UPN3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC1.45□□□□□ -2.18
MACF1Q9UPN3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC004925.1-201ENST00000624256 2706 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 IL6-203ENST00000401651 539 ntTSL 2 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC092868.3-201ENST00000560515 784 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 SKA2-207ENST00000583380 583 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AL732618.1-201ENST00000623251 301 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 NOL8P1-201ENST00000508336 3529 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC046144.1-201ENST00000478559 1853 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC007738.1-201ENST00000413892 348 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC103798.2-201ENST00000624292 632 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AL078604.1-201ENST00000404609 466 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 GAPDHP39-201ENST00000481866 979 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 MIR4301-201ENST00000577203 66 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 HMGB2P1-201ENST00000591146 634 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AL356274.1-201ENST00000617064 410 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 MUC2-202ENST00000613187 4845 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 DOCK11P1-201ENST00000553480 5932 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AL034370.1-201ENST00000397254 1590 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 RPS24P12-201ENST00000402084 394 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 RBMY1KP-201ENST00000423480 476 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 RHEBP2-201ENST00000450289 600 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 CACYBPP2-201ENST00000453625 678 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC008565.1-201ENST00000509046 885 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 RAC1P2-201ENST00000511164 579 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 NPM1P35-201ENST00000533043 868 ntBASIC1.44□□□□□ -2.18
MACF1Q9UPN3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms