Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LINC00622-201ENST00000562811 1570 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 USP9YP4-201ENST00000424401 1745 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 TCP11X1-202ENST00000622971 1372 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC092079.1-201ENST00000558620 1985 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTN3Q9P232 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTN3Q9P232 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNTN3Q9P232 RPL23AP57-201ENST00000332361 466 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 Y_RNA.46-201ENST00000362695 102 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 RNU6-1120P-201ENST00000362988 108 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 RNA5SP394-201ENST00000364216 119 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 RNU6-952P-201ENST00000391164 108 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 HMGB1P20-201ENST00000402555 677 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 RN7SKP206-201ENST00000410823 293 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AP000534.2-201ENST00000412729 568 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 TPMTP2-201ENST00000414372 726 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC010881.1-201ENST00000433830 235 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CNTN3Q9P232 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 RPL36AP39-201ENST00000445859 318 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC004980.3-201ENST00000447046 365 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 GAPDHP14-201ENST00000450472 937 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 SBDSP1-204ENST00000453858 737 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC022215.1-201ENST00000481770 362 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 RNU6-202P-201ENST00000515998 96 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 COX6CP8-201ENST00000522620 226 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AL355834.1-201ENST00000556602 3965 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC034105.3-201ENST00000565294 442 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC090312.1-201ENST00000580637 348 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 MIR4420-201ENST00000583944 77 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC243960.4-201ENST00000600532 288 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AL445222.1-201ENST00000607259 628 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AL365204.3-201ENST00000612448 685 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC024940.5-201ENST00000622889 474 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AC009161.2-201ENST00000624626 138 ntBASIC6.29□□□□□ -1.4
CNTN3Q9P232 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTN3Q9P232 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CNTN3Q9P232 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.29□□□□□ -1.4
CNTN3Q9P232 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 RNU6-730P-201ENST00000383954 104 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 RNU6-444P-201ENST00000383988 108 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 RN7SKP286-201ENST00000410894 299 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 RPL12P9-201ENST00000412942 488 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 NCOR1P3-201ENST00000420479 303 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 RPL34P3-201ENST00000421454 338 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 AL353777.1-201ENST00000425552 326 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 OR4F13P-201ENST00000428478 931 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 DNAJC19P5-201ENST00000443295 316 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 AP000281.1-201ENST00000444036 316 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 PRPF38AP1-201ENST00000451976 933 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 AL645937.3-201ENST00000453647 936 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 RPL31P50-201ENST00000471002 296 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC128716.1-201ENST00000475129 166 ntBASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.28□□□□□ -1.4
CNTN3Q9P232 AC022616.6-201ENST00000520479 119 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms