Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 OR52E6-202ENST00000379946 954 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AL136131.1-201ENST00000406079 803 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC073063.1-201ENST00000434352 607 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 ACTG1P13-201ENST00000486987 1043 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 FTH1P24-201ENST00000503502 462 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC009101.1-201ENST00000568135 242 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 MIR218-2-201ENST00000385006 110 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AL691447.1-201ENST00000419456 387 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC084357.1-201ENST00000473404 255 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 SNORA74D-201ENST00000516404 141 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC004825.2-201ENST00000616634 455 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC127502.3-201ENST00000636170 1206 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
CCDC88CQ9P219 AC134882.1-201ENST00000603738 1676 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 OTUD4P1-201ENST00000237841 3067 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 AL356968.1-201ENST00000416622 474 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 RPL31P12-201ENST00000422587 358 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 RWDD4P2-201ENST00000426392 563 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 MTND6P5-201ENST00000448266 512 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 RPL12P26-201ENST00000452430 487 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 RWDD4P1-201ENST00000488019 565 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 SNORA70.17-201ENST00000516449 133 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 AC009303.3-201ENST00000591103 736 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 TNPO1P3-201ENST00000436471 2662 ntBASIC3.35□□□□□ -1.87
CCDC88CQ9P219 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC88CQ9P219 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 RNA5SP235-201ENST00000365411 114 ntBASIC3.34□□□□□ -1.87
CCDC88CQ9P219 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AL590609.2-201ENST00000421430 368 ntBASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AL591503.2-201ENST00000442314 1005 ntBASIC3.34□□□□□ -1.87
CCDC88CQ9P219 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 ZNF415P1-201ENST00000582279 1166 ntBASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AL031985.2-201ENST00000600955 480 ntBASIC3.34□□□□□ -1.87
CCDC88CQ9P219 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC88CQ9P219 RNA5SP424-201ENST00000390988 115 ntBASIC3.34□□□□□ -1.88
CCDC88CQ9P219 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 PTP4A1P1-201ENST00000420539 515 ntBASIC3.34□□□□□ -1.88
CCDC88CQ9P219 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 RPS6P12-201ENST00000432491 726 ntBASIC3.34□□□□□ -1.88
CCDC88CQ9P219 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 MRPS31P2-201ENST00000451581 518 ntBASIC3.34□□□□□ -1.88
CCDC88CQ9P219 RPL23AP73-201ENST00000492507 471 ntBASIC3.34□□□□□ -1.88
CCDC88CQ9P219 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.34□□□□□ -1.88
CCDC88CQ9P219 AP000553.6-201ENST00000641242 118 ntBASIC3.34□□□□□ -1.88
CCDC88CQ9P219 AC095050.2-201ENST00000510748 1458 ntBASIC3.34□□□□□ -1.88
CCDC88CQ9P219 AC245100.2-201ENST00000454544 1679 ntBASIC3.34□□□□□ -1.88
CCDC88CQ9P219 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms