Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NOP56P3-201ENST00000549457 385 ntBASIC3.41□□□□□ -1.86
HMG20AQ9NP66 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.41□□□□□ -1.86
HMG20AQ9NP66 AL845331.3-202ENST00000562856 261 ntBASIC3.41□□□□□ -1.86
HMG20AQ9NP66 AC007448.1-201ENST00000582714 234 ntBASIC3.41□□□□□ -1.86
HMG20AQ9NP66 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.41□□□□□ -1.86
HMG20AQ9NP66 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.41□□□□□ -1.86
HMG20AQ9NP66 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.41□□□□□ -1.86
HMG20AQ9NP66 VN1R84P-201ENST00000593697 235 ntBASIC3.41□□□□□ -1.86
HMG20AQ9NP66 AL137849.1-201ENST00000604767 169 ntBASIC3.41□□□□□ -1.86
HMG20AQ9NP66 MIR6820-201ENST00000611508 62 ntBASIC3.41□□□□□ -1.86
HMG20AQ9NP66 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.41□□□□□ -1.86
HMG20AQ9NP66 AC119674.1-212ENST00000641155 993 ntBASIC3.41□□□□□ -1.86
HMG20AQ9NP66 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.41□□□□□ -1.86
HMG20AQ9NP66 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HMG20AQ9NP66 AC009501.3-201ENST00000605001 1352 ntBASIC3.4□□□□□ -1.86
HMG20AQ9NP66 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMG20AQ9NP66 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMG20AQ9NP66 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMG20AQ9NP66 AL353746.1-201ENST00000566293 6881 ntBASIC3.4□□□□□ -1.86
HMG20AQ9NP66 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 MIR937-201ENST00000401271 86 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 HMGB3P19-201ENST00000403971 560 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 Z86062.1-201ENST00000406773 777 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 RN7SKP33-201ENST00000410942 340 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 HSPE1P12-201ENST00000412576 301 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC108032.1-201ENST00000416706 207 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 CR848007.2-201ENST00000424918 787 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 OSTCP5-201ENST00000425293 453 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 HIGD1AP12-201ENST00000427832 281 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 CFTRP1-201ENST00000456646 183 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 SUMO1P1-201ENST00000497904 306 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AP003730.1-201ENST00000524605 285 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 MIR3138-201ENST00000585238 82 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC115621.1-201ENST00000604653 858 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC010200.2-201ENST00000605098 235 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AL359715.4-201ENST00000606629 1436 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC242628.1-201ENST00000606810 391 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AL118556.2-201ENST00000614375 824 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC010608.2-201ENST00000624830 470 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 U6.98-201ENST00000637157 84 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC073073.2-201ENST00000609827 2578 ntBASIC3.4□□□□□ -1.87
HMG20AQ9NP66 AC017002.4-201ENST00000604721 1525 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 OTUD4P1-201ENST00000237841 3067 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 RNU1-32P-201ENST00000363937 159 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 U3.15-201ENST00000365398 212 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 RNU11-4P-201ENST00000391149 133 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC010385.1-201ENST00000412374 256 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC048351.1-201ENST00000420064 602 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 RPL18P10-201ENST00000425606 538 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 OR5BE1P-201ENST00000425977 939 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 COX6CP15-201ENST00000426313 211 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 ZFAND6P1-201ENST00000434138 605 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 BTBD7P2-201ENST00000441962 620 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 HMGB1P5-202ENST00000451497 985 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 RPS4XP2-201ENST00000458402 793 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC084198.1-201ENST00000477747 402 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AL035404.1-201ENST00000497982 568 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC108157.1-201ENST00000510511 539 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.39□□□□□ -1.87
HMG20AQ9NP66 HAUS1P3-201ENST00000523909 662 ntBASIC3.39□□□□□ -1.87
HMG20AQ9NP66 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms