Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MRPL50P2-201ENST00000416821 482 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC018630.2-202ENST00000422992 927 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL589872.1-201ENST00000426602 288 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 IPO7P1-201ENST00000442031 636 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 RPL17P49-201ENST00000443728 411 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL161636.2-201ENST00000445179 927 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 FGF7P3-201ENST00000454645 303 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 MTCO1P42-201ENST00000457379 726 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL445687.2-201ENST00000458156 728 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 Y_RNA.632-201ENST00000459189 102 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC097493.1-201ENST00000463958 372 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC083798.1-201ENST00000472671 131 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC013356.1-201ENST00000489027 564 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 CYCSP22-201ENST00000517555 339 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC055876.1-202ENST00000567053 138 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 MTCYBP13-201ENST00000578634 1093 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC008737.2-201ENST00000599446 118 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC006006.1-201ENST00000603082 144 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC090525.3-201ENST00000605601 189 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AP005431.1-201ENST00000618479 319 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AL732618.1-201ENST00000623251 301 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC026634.1-201ENST00000634369 198 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AC138649.5-201ENST00000637456 137 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 MIR4302-201ENST00000638058 60 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 AP000473.2-201ENST00000602659 1537 ntBASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SSBP3Q9BWW4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 MIR323A-201ENST00000362199 86 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RNU6-282P-201ENST00000365357 103 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RN7SKP292-201ENST00000365522 317 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 MIR506-201ENST00000384998 124 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RNU6-907P-201ENST00000390924 102 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RNU6-510P-201ENST00000391239 108 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AL121835.1-201ENST00000404250 354 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AL390316.1-201ENST00000406279 553 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AL450338.1-201ENST00000407987 512 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 MIR1305-201ENST00000408300 86 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RN7SKP286-201ENST00000410894 299 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 SDHDP6-201ENST00000414693 480 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RPL34P3-201ENST00000421454 338 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 MRPS21P2-201ENST00000424704 264 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AL158073.1-201ENST00000426848 1104 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RPEP2-201ENST00000432149 701 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC024082.2-201ENST00000434771 238 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 SNRPEP7-201ENST00000438350 220 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RPL36AP39-201ENST00000445859 318 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 BX842559.2-201ENST00000451418 605 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 UBFD1P1-201ENST00000473259 814 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AL035690.1-201ENST00000490892 383 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC109481.1-201ENST00000509173 282 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 RNU6-1170P-201ENST00000515974 106 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.85□□□□□ -1.63
SSBP3Q9BWW4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms